RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 POU6F1Q14863 301 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 POLD3Q15054 466 aaPredicted RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 E2F5Q15329 346 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 DDR2Q16832 855 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 FAM83EQ2M2I3 478 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 FAM182AQ5T1J6 154 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 AGAP9Q5VTM2 703 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 LRRC8EQ6NSJ5 796 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 NEPROQ6NW34 567 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 ESRP1Q6NXG1 681 aaKnown RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 FUT10Q6P4F1 479 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 AAGABQ6PD74 315 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 RINLQ6ZS11 566 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 TTC7BQ86TV6 843 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 TREML1Q86YW5 311 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 SCUBE1Q8IWY4 988 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 PLD6Q8N2A8 252 aaKnown RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 AFAP1L2Q8N4X5 818 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 GPR150Q8NGU9 434 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 STMN2Q93045 179 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 HMCESQ96FZ2 354 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 CNDP1Q96KN2 507 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 APOL2Q9BQE5 337 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 TRMOQ9BU70 441 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 GATA5Q9BWX5 397 aaPredicted RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 POLR1EQ9GZS1 481 aaKnown RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 MAGEH1Q9H213 219 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 TASP1Q9H6P5 420 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 YY1AP1Q9H869 796 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 MARCH5Q9NX47 278 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 NDE1Q9NXR1 346 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 UBP1Q9NZI7 540 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 HACD3Q9P035 362 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 STX18Q9P2W9 335 aaKnown RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 PLA2G4CQ9UP65 541 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 PRG3Q9Y2Y8 225 aaPredicted RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 LRRC42Q9Y546 428 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 MICAL3Q7RTP6 2002 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 TRPC5OSA6NMA1 111 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 F5H5T6 163 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 F8W810 466 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 MATN2O00339 956 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 LIN7AO14910 233 aaPredicted RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 PRAMEF11O60813 436 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 PMPCBO75439 489 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 VAPBO95292 243 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 LATS1O95835 1130 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 TOP3BO95985 862 aaKnown RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 INHAP05111 366 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 KITP10721 976 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 OGNP20774 298 aaKnown RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 TACR2P21452 398 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 GLDCP23378 1020 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 ATP5F1P24539 256 aaPredicted RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 PSMA3P25788 255 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 ARNTP27540 789 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 GABRB3P28472 473 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 MAP2K2P36507 400 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 ETFBP38117 255 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 SLC1A2P43004 574 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 PPP3CCP48454 512 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 SLC11A1P49279 550 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 PGFP49763 221 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 RPL14P50914 215 aaKnown RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 COPAP53621 1224 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 IRX4P78413 519 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 IRX1P78414 480 aaPredicted RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 NSUN2Q08J23 767 aaKnown RBP eCLIP9.79□□□□□ -0.84
RTF1-206ENST00000560447 TAF10Q12962 218 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 MSLNQ13421 630 aaPredicted RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 LBRQ14739 615 aaKnown RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 HERC3Q15034 1050 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 C10orf120Q5SQS8 335 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 SLC8B1Q6J4K2 584 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 FBXL22Q6P050 247 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 KLC3Q6P597 504 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 ACAD11Q709F0 780 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 CHST9Q7L1S5 443 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 ADGRG6Q86SQ4 1221 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 SLC22A9Q8IVM8 553 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 CENPLQ8N0S6 344 aaPredicted RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 CRIPAKQ8N1N5 446 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 LRRC43Q8N309 656 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 TMEM151AQ8N4L1 468 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 CPSF7Q8N684 471 aaKnown RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 MAB21L3Q8N8X9 362 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 RBM15BQ8NDT2 890 aaKnown RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 GIMAP7Q8NHV1 300 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 TTC8Q8TAM2 541 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 JADE3Q92613 823 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 PLD4Q96BZ4 506 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 DDX50Q9BQ39 737 aaKnown RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 EBF4Q9BQW3 602 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 TTPALQ9BTX7 342 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 NDFIP2Q9NV92 336 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 PNPOQ9NVS9 261 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 NCKIPSDQ9NZQ3 722 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 MPP6Q9NZW5 540 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 MARCOQ9UEW3 520 aaPredicted RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 ANGPTL2Q9UKU9 493 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms