RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 IGSF6O95976 241 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 AMPD1P23109 780 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 EPHA8P29322 1005 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 GKP32189 559 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 MAN1A1P33908 653 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 RXRGP48443 463 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 RHOAP61586 193 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 TCEAL1Q15170 157 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 SHBQ15464 509 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 HADHQ16836 314 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 ZNF284Q2VY69 593 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 TMEM259Q4ZIN3 620 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 SETMARQ53H47 684 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 PARS2Q7L3T8 475 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 ZSCAN30Q86W11 494 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 RYBPQ8N488 228 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 TMEM145Q8NBT3 493 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 OR6K2Q8NGY2 324 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 SAP25Q8TEE9 199 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 RAB7BQ96AH8 199 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 MRFAP1L1Q96HT8 127 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 ETNK2Q9NVF9 386 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 INTUQ9ULD6 942 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 PCDHGA1Q9Y5H4 931 aa15.38■□□□□ 0.05
SNRPA1-210ENST00000560383 ZFYVE26Q68DK2 2539 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 A0A1W2PQU0 124 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 C16orf96A6NNT2 1141 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 PRAMEF26H0Y7S4 382 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 AREL1O15033 823 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 UGT2B4P06133 528 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 CDK4P11802 303 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 MAT2AP31153 395 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 CSNK1DP48730 415 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 IL9RQ01113 521 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 RAD51Q06609 339 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 IL10RBQ08334 325 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 RFTN1Q14699 578 aaPredicted RBP15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 SMAD1Q15797 465 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 FBXL19Q6PCT2 694 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 GDPD4Q6W3E5 623 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 GAS2L3Q86XJ1 694 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 CPNE8Q86YQ8 564 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 TP53INP2Q8IXH6 220 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 CCDC86Q9H6F5 360 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 SPTLC3Q9NUV7 552 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 DKK3Q9UBP4 350 aa15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 IPO11Q9UI26 975 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 ZFR2Q9UPR6 939 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-210ENST00000560383 TAF4O00268 1085 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 SPINT1O43278 529 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 TSPAN6O43657 245 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 ITGAVP06756 1048 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 C1SP09871 688 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 ABL2P42684 1182 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 ZNF75DP51815 510 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 CDH6P55285 790 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 TAS2R40P59535 323 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 NSUN2Q08J23 767 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 GRM3Q14832 879 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 KIAA1161Q6NSJ0 714 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 TMCO3Q6UWJ1 677 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 ARHGAP36Q6ZRI8 547 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 RHOT2Q8IXI1 618 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 NETO2Q8NC67 525 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 SLC35G2Q8TBE7 412 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 HCAR2Q8TDS4 363 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 KLHL32Q96NJ5 620 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 ZNF599Q96NL3 588 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 PSKH2Q96QS6 385 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 DOCK9Q9BZ29 2069 aa15.36■□□□□ 0.05
SNRPA1-210ENST00000560383 TSPAN11A1L157 253 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 DFFAO00273 331 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 ENC1O14682 589 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 INSIG1O15503 277 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 PALMO75781 387 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 PCDH8O95206 1070 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 LCA5LO95447 670 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 PEX11BO96011 259 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 KRT7P08729 469 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 CD48P09326 243 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 ARHGAP25P42331 645 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 SUOXP51687 545 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 RPS21P63220 83 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 DPYSL3Q14195 570 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 KRT81Q14533 505 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 PDK2Q15119 407 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 ATP13A4Q4VNC1 1196 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 SEL1L3Q68CR1 1132 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 KANSL1Q7Z3B3 1105 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 GATAD2AQ86YP4 633 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 LRRC49Q8IUZ0 686 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 ASB12Q8WXK4 309 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 RFFLQ8WZ73 363 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 FAF2Q96CS3 445 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 FEM1CQ96JP0 617 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 TUBGCP5Q96RT8 1024 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 ZNF670Q9BS34 389 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 SP110Q9HB58 689 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 ACACAQ13085 2346 aa15.35■□□□□ 0.05
SNRPA1-210ENST00000560383 GOLGA8CPA6NN73 597 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms