RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 CXorf40AQ8TE69 158 aa17.63■□□□□ 0.41
CRTC3-208ENST00000560098 CASKIN2Q8WXE0 1202 aa17.63■□□□□ 0.41
CRTC3-208ENST00000560098 GRAMD1AQ96CP6 724 aa17.63■□□□□ 0.41
CRTC3-208ENST00000560098 TBATAQ96M53 351 aa17.63■□□□□ 0.41
CRTC3-208ENST00000560098 PCDHB18PQ96TA0 734 aa17.63■□□□□ 0.41
CRTC3-208ENST00000560098 SELENOOQ9BVL4 669 aa17.63■□□□□ 0.41
CRTC3-208ENST00000560098 BOCQ9BWV1 1114 aa17.63■□□□□ 0.41
CRTC3-208ENST00000560098 C1QTNF7Q9BXJ2 289 aa17.63■□□□□ 0.41
CRTC3-208ENST00000560098 TCEAL2Q9H3H9 227 aaPredicted RBP17.63■□□□□ 0.41
CRTC3-208ENST00000560098 NOL6Q9H6R4 1146 aaKnown RBP17.63■□□□□ 0.41
CRTC3-208ENST00000560098 TOR1BO14657 336 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 MMP20O60882 483 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 GCATO75600 419 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 IGSF6O95976 241 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 EPHB2P29323 1055 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 RPIAP49247 311 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 INO80DQ53TQ3 878 aaPredicted RBP17.62■□□□□ 0.41
CRTC3-208ENST00000560098 PRRT3Q5FWE3 981 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 WDR59Q6PJI9 974 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 PHACTR4Q8IZ21 702 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 PYROXD2Q8N2H3 581 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 RTL3Q8N8U3 475 aaKnown RBP17.62■□□□□ 0.41
CRTC3-208ENST00000560098 C3orf20Q8ND61 904 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 GLMNQ92990 594 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 SLC13A1Q9BZW2 595 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 ASCL3Q9NQ33 180 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 THSD1Q9NS62 852 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 PNMA8BQ9ULN7 279 aaPredicted RBP17.62■□□□□ 0.41
CRTC3-208ENST00000560098 SATB2Q9UPW6 733 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 MFHAS1Q9Y4C4 1052 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 CHD5Q8TDI0 1954 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 SHROOM3Q8TF72 1996 aa17.62■□□□□ 0.41
CRTC3-208ENST00000560098 MGAQ8IWI9 3026 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 LMO7DNF2Z398 122 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 MUSKO15146 869 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 CALB1P05937 261 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 TIMP2P16035 220 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 ITIH2P19823 946 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 UCNP55089 124 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 ADKP55263 362 aaKnown RBP17.61■□□□□ 0.41
CRTC3-208ENST00000560098 TMPRSS3P57727 454 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 RHOAP61586 193 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 C1orf61Q13536 156 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 CLEC16AQ2KHT3 1053 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 C3orf38Q5JPI3 329 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 EFHC2Q5JST6 749 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 C6orf132Q5T0Z8 1188 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 IGF2-ASQ6U949 168 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 MACC1Q6ZN28 852 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 RBM44Q6ZP01 1051 aaKnown RBP17.61■□□□□ 0.41
CRTC3-208ENST00000560098 PHF13Q86YI8 300 aaPredicted RBP17.61■□□□□ 0.41
CRTC3-208ENST00000560098 NETO2Q8NC67 525 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 KCNE4Q8WWG9 221 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 ATXN7L3BQ96GX2 97 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 EPAS1Q99814 870 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 LRRC61Q9BV99 259 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 KLC2Q9H0B6 622 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 MBNL1Q9NR56 388 aaKnown RBP17.61■□□□□ 0.41
CRTC3-208ENST00000560098 DKK3Q9UBP4 350 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 SIK3Q9Y2K2 1263 aa17.61■□□□□ 0.41
CRTC3-208ENST00000560098 SIGLEC16A6NMB1 481 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 TCEA3O75764 348 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 ANXA6P08133 673 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 EIF4A3P38919 411 aaKnown RBP17.6■□□□□ 0.41
CRTC3-208ENST00000560098 YBEYP58557 167 aaPredicted RBP17.6■□□□□ 0.41
CRTC3-208ENST00000560098 PERM1Q5SV97 790 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 FAXCQ5TGI0 409 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 SCYL2Q6P3W7 929 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 CRTC1Q6UUV9 634 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 SLC35F3Q8IY50 421 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 TP53I13Q8NBR0 393 aaPredicted RBP17.6■□□□□ 0.41
CRTC3-208ENST00000560098 NAT6Q93015 286 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 HMCESQ96FZ2 354 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 VCPIP1Q96JH7 1222 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 WRAP53Q9BUR4 548 aaKnown RBP17.6■□□□□ 0.41
CRTC3-208ENST00000560098 DPH1Q9BZG8 443 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 ENTPD2Q9Y5L3 495 aa17.6■□□□□ 0.41
CRTC3-208ENST00000560098 A0A1W2PNU3 283 aaPredicted RBP17.59■□□□□ 0.41
CRTC3-208ENST00000560098 RASA4BC9J798 803 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 ERVH48-1M5A8F1 160 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 YY2O15391 372 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 KLK10O43240 276 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 CCP110O43303 1012 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 RASA4O43374 803 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 CREB3O43889 395 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 TSHRP16473 764 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 RBMS1P29558 406 aaKnown RBP17.59■□□□□ 0.41
CRTC3-208ENST00000560098 SUOXP51687 545 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 ZNF143P52747 638 aaPredicted RBP17.59■□□□□ 0.41
CRTC3-208ENST00000560098 PPARDQ03181 441 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 SERINC3Q13530 473 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 SYCP1Q15431 976 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 PARP15Q460N3 678 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 PCSK4Q6UW60 755 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 SLC46A1Q96NT5 459 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 CPEB1Q9BZB8 566 aaKnown RBP17.59■□□□□ 0.41
CRTC3-208ENST00000560098 CLPBQ9H078 707 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 CATSPERBQ9H7T0 1116 aa17.59■□□□□ 0.41
CRTC3-208ENST00000560098 CPNE5Q9HCH3 593 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms