RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NDFIP2Q9NV92 336 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 MPP6Q9NZW5 540 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 MARCH2Q9P0N8 246 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 PHF24Q9UPV7 400 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 RUVBL2Q9Y230 463 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 PRG3Q9Y2Y8 225 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 LOC285095A0A1B0GVY8 99 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 A0A1W2PQ45 241 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 A0A1W2PQY0 241 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 MROH6A6NGR9 719 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 TRPC5OSA6NMA1 111 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 TK2O00142 265 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 NVLO15381 856 aaKnown RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PHGDHO43175 533 aaKnown RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 DLX3O60479 287 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PRAMEF11O60813 436 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 RAMP2O60895 175 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 OBSL1O75147 1896 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PIGNO95427 931 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PENKP01210 267 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 MMP2P08253 660 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 RBP1P09455 135 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 THRAP10827 490 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 COX4I1P13073 169 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 CPB1P15086 417 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 HLA-DPA1P20036 260 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ATP5F1P24539 256 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PBX3P40426 434 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ABCG1P45844 678 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 CPA2P48052 419 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 GRIA4P48058 902 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PTDSS1P48651 473 aaKnown RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 TAS2R39P59534 338 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ACTR3P61158 418 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 USP46P62068 366 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 MPP1Q00013 466 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PFKPQ01813 784 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 GALNT1Q10472 559 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 KLF10Q13118 480 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 CTBP1Q13363 440 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 MSLNQ13421 630 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 SEPT6Q14141 434 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 SCN5AQ14524 2016 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 NAA25Q14CX7 972 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PSMD5Q16401 504 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 FAM83EQ2M2I3 478 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 AGAP9Q5VTM2 703 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 FAM171A1Q5VUB5 890 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 SEL1L3Q68CR1 1132 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF470Q6ECI4 717 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 FBXL22Q6P050 247 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 FUT10Q6P4F1 479 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 KLC3Q6P597 504 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 LRRC74BQ6ZQY2 392 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ANKS3Q6ZW76 656 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ACAD11Q709F0 780 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 TMC7Q7Z402 723 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 DENND6AQ8IWF6 608 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ABI1Q8IZP0 508 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 BBS5Q8N3I7 341 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 AFAP1L2Q8N4X5 818 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PPFIBP2Q8ND30 876 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PDZD8Q8NEN9 1154 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ACVR1CQ8NER5 493 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 N4BP2L2Q92802 583 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 HMCESQ96FZ2 354 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 NAF1Q96HR8 494 aaKnown RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 CASD1Q96PB1 797 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 MAGEH1Q9H213 219 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF385DQ9H6B1 395 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 POPDC3Q9HBV1 291 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 TCF7L2Q9NQB0 619 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 STARD7Q9NQZ5 370 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 NDE1Q9NXR1 346 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PRPF19Q9UMS4 504 aaKnown RBP8.16□□□□□ -1.1
SMAD3-212ENST00000559937 ARHGAP26Q9UNA1 814 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 PCDHB7Q9Y5E2 793 aa8.16□□□□□ -1.1
SMAD3-212ENST00000559937 DENND4CQ5VZ89 1909 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 A0A088AWK7 358 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SLC12A8A0AV02 714 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 H0Y3Z8 333 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 J3KR12 359 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 PITPNM1O00562 1244 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 ENPP3O14638 875 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 GRID2O43424 1007 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 KRT36O76013 467 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 ALDH2P05091 517 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 LTA4HP09960 611 aaKnown RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 NCF2P19878 526 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 OGNP20774 298 aaKnown RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 TACR2P21452 398 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 MPSTP25325 297 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 GRK4P32298 578 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 CD86P42081 329 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SLC11A1P49279 550 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 GPR15P49685 360 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 CLNS1AP54105 237 aaKnown RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 PRMT2P55345 433 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms