RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 BMFQ96LC9 184 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 MYOCQ99972 504 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 TRIM62Q9BVG3 475 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 RAB6CQ9H0N0 254 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 TSPY26PQ9H489 355 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 FAM204AQ9H8W3 233 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 PREBQ9HCU5 417 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 FZD3Q9NPG1 666 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 PLCB1Q9NQ66 1216 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 TMEM63CQ9P1W3 806 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 APEX2Q9UBZ4 518 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 VPS51Q9UID3 782 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 TPX2Q9ULW0 747 aaKnown RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 CEP83Q9Y592 693 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 PCDHB1Q9Y5F3 818 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ACTL7AQ9Y615 435 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 TDRD6O60522 2096 aaKnown RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 ASH1LQ9NR48 2969 aaKnown RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 PTPRQQ9UMZ3 2332 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 FAM170AA1A519 330 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 GOLGA6L4A6NEF3 574 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 POM121BA6NF01 834 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 M0QYT0 321 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 SLC31A1O15431 190 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 RGS9O75916 674 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 PIAS2O75928 621 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 MT-CO3P00414 261 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 THEGLP0DJG4 465 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 CDK4P11802 303 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 CHRNA3P32297 505 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 CDH5P33151 784 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 NOS2P35228 1153 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 HNF1BP35680 557 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 NUDT1P36639 197 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 FLT3P36888 993 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 NNMTP40261 264 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 GDF10P55107 478 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 CDH4P55283 916 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 CLDN2P57739 230 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 TLE3Q04726 772 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 NME3Q13232 169 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 ZNF177Q13360 481 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 STAT4Q14765 748 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 SETMARQ53H47 684 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 C2CD6Q53TS8 623 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 SLC45A4Q5BKX6 768 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 EFHC1Q5JVL4 640 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 MIIPQ5JXC2 388 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 RABGAP1LQ5R372 815 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 FAM46CQ5VWP2 391 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 OR6B2Q6IFH4 312 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 NEK5Q6P3R8 708 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 DPY19L3Q6ZPD9 716 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 C11orf57Q6ZUT1 292 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 ENOSF1Q7L5Y1 443 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 ZSCAN30Q86W11 494 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 HORMAD1Q86X24 394 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 CCDC117Q8IWD4 279 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 FAM71AQ8IYT1 594 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 OXR1Q8N573 874 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 TMIEQ8NEW7 156 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 OR7D4Q8NG98 312 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 OR4C6Q8NH72 309 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 PGAP3Q96FM1 320 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 KLHDC7BQ96G42 594 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 HIC2Q96JB3 615 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 TBCBQ99426 244 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 KLF6Q99612 283 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 MAGEB5Q9BZ81 275 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 TKTL2Q9H0I9 626 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 SIK2Q9H0K1 926 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 KLHL11Q9NVR0 708 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 MPP6Q9NZW5 540 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 RWDD2AQ9UIY3 292 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 SLC25A13Q9UJS0 675 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 TMEM59LQ9UK28 342 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 VPS28Q9UK41 221 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 DNAJC12Q9UKB3 198 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 PNMA8BQ9ULN7 279 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 NEU3Q9UQ49 428 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 CLCA2Q9UQC9 943 aa5.92□□□□□ -1.46
USP3-215ENST00000559771 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.92□□□□□ -1.46
USP3-215ENST00000559771 KNTC1P50748 2209 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 SYCE3A1L190 88 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 GTPBP10A4D1E9 387 aaKnown RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 PMS2P1A4D2B8 440 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 C1QTNF3-AMACRE9PGA6 284 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 KPNA3O00505 521 aaPredicted RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 FFAR2O15552 330 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 LZTS3O60299 673 aaPredicted RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 OPA1O60313 960 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 LEFTY1O75610 366 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 NEBLO76041 1014 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 ENDOD1O94919 500 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 TPM3P06753 285 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 CKMT1AP12532 417 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 HNRNPA2B1P22626 353 aaKnown RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 USP8P40818 1118 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 GABRB2P47870 512 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms