RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CMTM5Q96DZ9 223 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 ZBTB18Q99592 522 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 MIR1-1HGQ9H1L0 117 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 TNKS2Q9H2K2 1166 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 GLOD4Q9HC38 313 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 EFR3BQ9Y2G0 817 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 CRYL1Q9Y2S2 319 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 ACOT9Q9Y305 439 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 LRRC37AA6NMS7 1700 aa10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 COL11A2P13942 1736 aaPredicted RBP10.76□□□□□ -0.69
CARMIL3-202ENST00000559694 DDX3YO15523 660 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 SEC24DO94855 1032 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CLPTM1O96005 669 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 ENO3P13929 434 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CD151P48509 253 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 WLSQ5T9L3 541 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 OLFML1Q6UWY5 402 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TRMT11Q7Z4G4 463 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PCDH19Q8TAB3 1148 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CXorf40AQ8TE69 158 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CNBD2Q96M20 576 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 ABCB8Q9NUT2 735 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 WNT6Q9Y6F9 365 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CLUHO75153 1309 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 NCF1BA6NI72 391 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TTC36A6NLP5 189 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 NCF1CA8MVU1 366 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PDE5AO76074 875 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 NCF1P14598 390 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PTPN7P35236 360 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 ABCG1P45844 678 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PFKPQ01813 784 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 OCA2Q04671 838 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 BLMHQ13867 455 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 GALNT3Q14435 633 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TRMT5Q32P41 509 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 C2orf27AQ580R0 203 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 SGO1Q5FBB7 561 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 RNF43Q68DV7 783 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 FBXL22Q6P050 247 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 IYDQ6PHW0 289 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 OTOP3Q7RTS5 596 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 IL22Q9GZX6 179 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 ZCWPW1Q9H0M4 648 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 ASB8Q9H765 288 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D23Q9NUY8 699 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 ARMCX1Q9P291 453 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PCYOX1Q9UHG3 505 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 RUVBL2Q9Y230 463 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 KCNA5P22460 613 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 COPAP53621 1224 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CAP1Q01518 475 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CSHL1Q14406 222 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 SPDYAQ5MJ70 313 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 FAM43BQ6ZT52 329 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 RTL3Q8N8U3 475 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 SNX31Q8N9S9 440 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 RNF217Q8TC41 542 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PSMG2Q969U7 264 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PWWP2AQ96N64 755 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TRMT61BQ9BVS5 477 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 C1QTNF7Q9BXJ2 289 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 FAM192AQ9GZU8 254 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 MAGEH1Q9H213 219 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 FZD10Q9ULW2 581 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PTPRZ1P23471 2315 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3DA0A087WVF3 549 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3IA0A087WXS9 549 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3EA0A087X179 549 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3KA0A087X1G2 549 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3FA6NER0 549 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3LB9A6J9 549 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PRPF4O43172 522 aaKnown RBP eCLIP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 NDUFS2O75306 463 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 OAZ2O95190 189 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 DNTTP04053 509 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 RHOP08100 348 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3HP0C7X1 549 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PGAM1P18669 254 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 DRG2P55039 364 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3GQ6DHY5 549 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TXNRD3NBQ6F5E7 133 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3CQ6IPX1 549 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TRAPPC5Q8IUR0 188 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D3Q8IZP1 549 aaPredicted RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CMTM8Q8IZV2 173 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 C3orf58Q8NDZ4 430 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 HMCESQ96FZ2 354 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 MPP4Q96JB8 637 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 C17orf80Q9BSJ5 609 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 CCDC134Q9H6E4 229 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 SLCO1B3Q9NPD5 702 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 DDX18Q9NVP1 670 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 WWOXQ9NZC7 414 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 MTRRQ9UBK8 725 aa10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 MYH9P35579 1960 aaKnown RBP10.75□□□□□ -0.69
CARMIL3-202ENST00000559694 PAPPA2Q9BXP8 1791 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 DPPA5A6NC42 116 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms