RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 THEGLP0DJG4 465 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 XPAP23025 273 aaPredicted RBP12.74□□□□□ -0.37
LRRC28-214ENST00000559433 AMPD1P23109 780 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 CDH6P55285 790 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 CLDN2P57739 230 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 IL10RBQ08334 325 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 FGL2Q14314 439 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 GRM3Q14832 879 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 SHBQ15464 509 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 ASTE1Q2TB18 679 aaPredicted RBP12.74□□□□□ -0.37
LRRC28-214ENST00000559433 CFAP58Q5T655 872 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 GCNT7Q6ZNI0 430 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 H2AFVQ71UI9 128 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 GLRX5Q86SX6 157 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 TTC7BQ86TV6 843 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 ZSCAN30Q86W11 494 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 CNGA4Q8IV77 575 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 LZTR1Q8N653 840 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 CCDC42Q96M95 316 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 SLC17A9Q9BYT1 436 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 CPEB1Q9BZB8 566 aaKnown RBP12.74□□□□□ -0.37
LRRC28-214ENST00000559433 SPTLC3Q9NUV7 552 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 ETNK2Q9NVF9 386 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 IPO11Q9UI26 975 aaKnown RBP12.74□□□□□ -0.37
LRRC28-214ENST00000559433 EPG5Q9HCE0 2579 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 IGLON5A6NGN9 336 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 A6NNZ2 444 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 TMEM110-MUSTN1A8MSY1 372 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 AKR1B15C9JRZ8 316 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-214ENST00000559433 LDOC1O95751 146 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-214ENST00000559433 PAK4O96013 591 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-214ENST00000559433 PROS1P07225 676 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 TMEM253P0C7T8 217 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 EPHA8P29322 1005 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-214ENST00000559433 SERPINB6P35237 376 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 RGRP47804 291 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 RFTN1Q14699 578 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-214ENST00000559433 SARM1Q6SZW1 724 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 UNQ6494/PRO21346Q6UXR6 183 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 PTAR1Q7Z6K3 402 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-214ENST00000559433 ABI3BPQ7Z7G0 1075 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 CPNE8Q86YQ8 564 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 TP53INP2Q8IXH6 220 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 TSEN2Q8NCE0 465 aaKnown RBP12.73□□□□□ -0.37
LRRC28-214ENST00000559433 OR13H1Q8NG92 308 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 FAM174AQ8TBP5 190 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 CXorf40AQ8TE69 158 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 SAP25Q8TEE9 199 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 TSC1Q92574 1164 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 TUBGCP5Q96RT8 1024 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 CHP1Q99653 195 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 CALN1Q9BXU9 219 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 TRIM5Q9C035 493 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 NHEJ1Q9H9Q4 299 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-214ENST00000559433 KLHL11Q9NVR0 708 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 DKK3Q9UBP4 350 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 LCMT1Q9UIC8 334 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 MSRB2Q9Y3D2 182 aa12.73□□□□□ -0.37
LRRC28-214ENST00000559433 PTPRBP23467 1997 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 FPGTO14772 594 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 AREL1O15033 823 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 RAD51BO15315 384 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 CD48P09326 243 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 ATXN1LP0C7T5 689 aaKnown RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 TIMP2P16035 220 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 SERPINA4P29622 427 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 RXRGP48443 463 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 CSNK1DP48730 415 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 ZNF235Q14590 738 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 LBRQ14739 615 aaKnown RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 TMCO4Q5TGY1 634 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 KYAT3Q6YP21 454 aaKnown RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 Q6ZSR6 202 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 RAB44Q7Z6P3 723 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 SRLQ86TD4 932 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 SLCO6A1Q86UG4 719 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 DCP2Q8IU60 420 aaKnown RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 CAMK1DQ8IU85 385 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 ATPAF2Q8N5M1 289 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 KCTD6Q8NC69 237 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 HCAR2Q8TDS4 363 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 ADAMTS14Q8WXS8 1223 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 ZNF641Q96N77 438 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 WRAP53Q9BUR4 548 aaKnown RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 C1QTNF2Q9BXJ5 285 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 SUV39H2Q9H5I1 410 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 ATP13A3Q9H7F0 1226 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 RCOR3Q9P2K3 495 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 SEPT3Q9UH03 358 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 KLK13Q9UKR3 277 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 HS3ST3A1Q9Y663 406 aa12.72□□□□□ -0.37
LRRC28-214ENST00000559433 MAP1BP46821 2468 aaKnown RBP12.72□□□□□ -0.37
LRRC28-214ENST00000559433 SPEGQ15772 3267 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 TSPAN11A1L157 253 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 TMEM8BA6NDV4 472 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 POM121BA6NF01 834 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 C1QTNF9BB2RNN3 333 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms