RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 LGI2Q8N0V4 545 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 AHI1Q8N157 1196 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 ZNF655Q8N720 491 aaPredicted RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 HJURPQ8NCD3 748 aaPredicted RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 DQX1Q8TE96 717 aaKnown RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 WFIKKN2Q8TEU8 576 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 RNF34Q969K3 372 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 MYEOVQ96EZ4 313 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 PRICKLE1Q96MT3 831 aaPredicted RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 SCNM1Q9BWG6 230 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 SLC2A11Q9BYW1 496 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 LHX5Q9H2C1 402 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 FAM204AQ9H8W3 233 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 CAPN10Q9HC96 672 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 WSB2Q9NYS7 404 aaPredicted RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 XPO7Q9UIA9 1087 aaKnown RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 DCHS1Q96JQ0 3298 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 WDR87Q6ZQQ6 2873 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 NUMA1Q14980 2115 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 A0A1B0GTW7 788 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 A0A1B0GVT2 93 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 E5RJQ4 531 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 H0Y626 953 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 NPC1O15118 1278 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 P4HA2O15460 535 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 TIMM44O43615 452 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 SH3BP5O60239 455 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 DNTTP04053 509 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 ATP5BP06576 529 aaKnown RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 PNMA6AP0CW24 399 aaPredicted RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 SLC9A1P19634 815 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 ACSL1P33121 698 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 HOXD12P35452 270 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 CSKP41240 450 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 ACADSBP45954 432 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 CSNK1EP49674 416 aaKnown RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 ZNF132P52740 706 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 COPAP53621 1224 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 ST8SIA6P61647 398 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 FAM193AP78312 1265 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 PITX1P78337 314 aaPredicted RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 GCNT1Q02742 428 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 GRIK2Q13002 908 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 TAF5Q15542 800 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 RNF219Q5W0B1 726 aaPredicted RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 RAP1GAP2Q684P5 730 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 TRIM65Q6PJ69 517 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 OR2T3Q8NH03 318 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 SETD7Q8WTS6 366 aaKnown RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 IRGQQ8WZA9 623 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 ZNF419Q96HQ0 510 aaPredicted RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 HSFY1Q96LI6 401 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 SERPINB11Q96P15 392 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 DDX50Q9BQ39 737 aaKnown RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 NUP58Q9BVL2 599 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 PDCL3Q9H2J4 239 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 C6orf106Q9H6K1 298 aaPredicted RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 SYNCQ9H7C4 482 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 IL21RQ9HBE5 538 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 PLCB1Q9NQ66 1216 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 PRSS16Q9NQE7 514 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 ITM2CQ9NQX7 267 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 USP36Q9P275 1121 aaKnown RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 CYTH4Q9UIA0 394 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 CACNA1EQ15878 2313 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 ACACBO00763 2458 aa7.57□□□□□ -1.2
SPG11-213ENST00000558988 MAP1BP46821 2468 aaKnown RBP7.57□□□□□ -1.2
SPG11-213ENST00000558988 CKAP5Q14008 2032 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 PMM2O15305 246 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 BCAT2O15382 392 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 PAPSS1O43252 624 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 SEMA4FO95754 770 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 LATS1O95835 1130 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 TRUB2O95900 331 aaKnown RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 IGLV3-27P01718 113 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 FYNP06241 537 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 DLDP09622 509 aaKnown RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 OXTRP30559 389 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 MC3RP41968 323 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 GPD2P43304 727 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 PSMD8P48556 350 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 STK19P49842 368 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 ZNF445P59923 1031 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 UBE2HP62256 183 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 SHC2P98077 582 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 NME3Q13232 169 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 PDCLQ13371 301 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 CAMK2GQ13555 558 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 ENPP2Q13822 863 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 RAPGEF1Q13905 1077 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 E2F5Q15329 346 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 TTC31Q49AM3 519 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 DCAF6Q58WW2 860 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 FSCBQ5H9T9 825 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 PITRM1Q5JRX3 1037 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 ZNF776Q68DI1 518 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 OR6B2Q6IFH4 312 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 UNQ6494/PRO21346Q6UXR6 183 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 GBP6Q6ZN66 633 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 SND1Q7KZF4 910 aaKnown RBP eCLIP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms