RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PCED1AQ9H1Q7 454 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 NOL6Q9H6R4 1146 aaKnown RBP6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 ATP13A1Q9HD20 1204 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 GPATCH2LQ9NWQ4 482 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 FBXL12Q9NXK8 326 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 SARDHQ9UL12 918 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 NENFQ9UMX5 172 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 SCML1Q9UN30 329 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 ACTL7AQ9Y615 435 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 BZW2Q9Y6E2 419 aaKnown RBP6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 DOCK9Q9BZ29 2069 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 PLXNA2O75051 1894 aa6.15□□□□□ -1.43
CTDSPL2-204ENST00000558966 ACACBO00763 2458 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 PCNX2A6NKB5 2137 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 C4orf47A7E2U8 309 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 RNF103O00237 685 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 CBX4O00257 560 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 PLK4O00444 970 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 MCF2LO15068 1137 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 RNASEH1O60930 286 aaKnown RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZNF821O75541 412 aaPredicted RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 RNASEH2AO75792 299 aaKnown RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 CD160O95971 181 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 ALBP02768 609 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 CTSLP07711 333 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 SERPINF2P08697 491 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 MYBL1P10243 752 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 ENGP17813 658 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 C5AR1P21730 350 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 EPHB2P29323 1055 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 SLC8A1P32418 973 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 AIF1P55008 147 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 SEPT6Q14141 434 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 CA9Q16790 459 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 DUOXA1Q1HG43 343 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 ACCSLQ4AC99 568 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 WDR45BQ5MNZ6 344 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 SYCP2LQ5T4T6 812 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 DAB2IPQ5VWQ8 1189 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 SPECC1LQ69YQ0 1117 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 C22orf39Q6P5X5 142 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 VSTM4Q8IW00 320 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 SULF2Q8IWU5 870 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZCCHC9Q8N567 271 aaKnown RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 IL22RA1Q8N6P7 574 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 GOLGA6L1Q8N7Z2 621 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 RTL3Q8N8U3 475 aaKnown RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 ATP11CQ8NB49 1132 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 OR2A12Q8NGT7 310 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 CEP76Q8TAP6 659 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 OR8D1Q8WZ84 308 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 ARHGEF26Q96DR7 871 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 TRIM11Q96F44 468 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 ORAI3Q9BRQ5 295 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 SNRNP25Q9BV90 132 aaKnown RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 NUSAP1Q9BXS6 441 aaKnown RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 THAP2Q9H0W7 228 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 NEUROG2Q9H2A3 272 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 RETREG1Q9H6L5 497 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 SGK2Q9HBY8 427 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 TMEM9BQ9NQ34 198 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 MYO1AQ9UBC5 1043 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 EIF2B4Q9UI10 523 aaKnown RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 DNAI1Q9UI46 699 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 FZD4Q9ULV1 537 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 AP4E1Q9UPM8 1137 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.14□□□□□ -1.434e-7■□□□□ 10.4
CTDSPL2-204ENST00000558966 SCINQ9Y6U3 715 aa6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 TP53BP1Q12888 1972 aaPredicted RBP6.14□□□□□ -1.43
CTDSPL2-204ENST00000558966 MED19A0JLT2 244 aaPredicted RBP6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 ALOX15BO15296 676 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 CBFA2T2O43439 604 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 CREB3O43889 395 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 RAMP2O60895 175 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 LRCH4O75427 683 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 IL1BP01584 269 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 IGHV4-34P06331 123 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 TPM3P06753 285 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 TCF4P15884 667 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 NME2P22392 152 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 MIPP30301 263 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 SERPINH1P50454 418 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 GALCP54803 685 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 ADPRHP54922 357 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 RPS26P62854 115 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 GFPT1Q06210 699 aaPredicted RBP6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 TRIM14Q14142 442 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 POM121L1PQ3SYA9 428 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 IL31Q6EBC2 164 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 ALKBH5Q6P6C2 394 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 NCEH1Q6PIU2 408 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 SLCO4C1Q6ZQN7 724 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 C8orf86Q6ZUL3 223 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 RABEPKQ7Z6M1 372 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 DSG4Q86SJ6 1040 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 TRIM42Q8IWZ5 723 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 HDDC3Q8N4P3 179 aa6.13□□□□□ -1.43
CTDSPL2-204ENST00000558966 CHST14Q8NCH0 376 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms