RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 POTEHQ6S545 545 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 MICALCLQ6ZW33 695 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 GET4Q7L5D6 327 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 KCNMB4Q86W47 210 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 PTCD2Q8WV60 388 aaKnown RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 PTPRN2Q92932 1015 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 FAM111AQ96PZ2 611 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 RBBP8Q99708 897 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 PAIP2Q9BPZ3 127 aaKnown RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 MGME1Q9BQP7 344 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 FSD1LQ9BXM9 530 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 SLC46A2Q9BY10 475 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 SMG9Q9H0W8 520 aaKnown RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 SLCO1B3Q9NPD5 702 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 CPQQ9Y646 472 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 TRAV19A0A0A6YYK7 116 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 LOC285095A0A1B0GVY8 99 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 H3BQ06 376 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-207ENST00000558763 ZNF197O14709 1029 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 TSPAN3O60637 253 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 PAPLNO95428 1278 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 CD160O95971 181 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 RGRP47804 291 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 PCSK7Q16549 785 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 ARHGAP15Q53QZ3 475 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 LGSNQ5TDP6 509 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 KDELC2Q7Z4H8 507 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-207ENST00000558763 ZNF354CQ86Y25 554 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 CNTN4Q8IWV2 1026 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 PCMTD2Q9NV79 361 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 PLLPQ9Y342 182 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 ATXN2Q99700 1313 aaKnown RBP13.09□□□□□ -0.31
SMAD3-207ENST00000558763 GOLGA8TH3BQL2 631 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 COPEO14579 308 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 TPP1O14773 563 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 KDELR3O43731 214 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 GSRP00390 522 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 PRKCGP05129 697 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 CR2P20023 1033 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 FSHRP23945 695 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 GBP2P32456 591 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-207ENST00000558763 LIMK2P53671 638 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 SLC7A9P82251 487 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 PDE1CQ14123 709 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-207ENST00000558763 COL19A1Q14993 1142 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 FSCBQ5H9T9 825 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 HHATQ5VTY9 493 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 ESRP1Q6NXG1 681 aaKnown RBP13.09□□□□□ -0.31
SMAD3-207ENST00000558763 CACNA2D3Q8IZS8 1091 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 ACVR1CQ8NER5 493 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 WFDC5Q8TCV5 224 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 MSLNLQ96KJ4 702 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 ZSWIM3Q96MP5 696 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 PSKH2Q96QS6 385 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 SEMA3CQ99985 751 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
SMAD3-207ENST00000558763 POLR1EQ9GZS1 481 aaKnown RBP13.09□□□□□ -0.31
SMAD3-207ENST00000558763 S1PR5Q9H228 398 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 VPS11Q9H270 941 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 OR51B4Q9Y5P0 310 aa13.09□□□□□ -0.31
SMAD3-207ENST00000558763 COL6A3P12111 3177 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 SIN3BO75182 1162 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 ZMPSTE24O75844 475 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 NEBLO76041 1014 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 RHOCP08134 193 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 GABRB3P28472 473 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 CRHR1P34998 444 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 AVPR1AP37288 418 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 ARF5P84085 180 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 SIRPB2Q5JXA9 342 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 GRTP1Q5TC63 336 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 PDPK2PQ6A1A2 396 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 STRA8Q7Z7C7 330 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 NDUFAF2Q8N183 169 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 SLC25A41Q8N5S1 370 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 ACMSDQ8TDX5 336 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 NSMCE1Q8WV22 266 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 ZNF75CPQ92670 426 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-207ENST00000558763 ALG14Q96F25 216 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 TRIB3Q96RU7 358 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 RANBP9Q96S59 729 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 C20orf96Q9NUD7 363 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-207ENST00000558763 GGT7Q9UJ14 662 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 EMCNQ9ULC0 261 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
SMAD3-207ENST00000558763 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 EDF1O60869 148 aaKnown RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 KCNA5P22460 613 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 GMPRP36959 345 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 ABCG1P45844 678 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 SERPINB4P48594 390 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 ITKQ08881 620 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 ZNF177Q13360 481 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 ZNF235Q14590 738 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms