RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 RLN3Q8WXF3 142 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 VOPP1Q96AW1 172 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 GBA3Q9H227 469 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 CD93Q9NPY3 652 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 ITM2CQ9NQX7 267 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 CYP8B1Q9UNU6 501 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 RAI2Q9Y5P3 530 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 CCDC163A0A0D9SF12 145 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 ZNF217O75362 1048 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 MMP2P08253 660 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 SP9P0CG40 484 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 ITGB7P26010 798 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 TPMTP51580 245 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 SKOR1P84550 965 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 CNTN1Q12860 1018 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 TRAF2Q12933 501 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 P3H1Q32P28 736 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 USP39Q53GS9 565 aaKnown RBP21.48■■□□□ 1.03
CASC4-204ENST00000557945 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.48■■□□□ 1.03
CASC4-204ENST00000557945 PRUNE1Q86TP1 453 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 WDR5BQ86VZ2 330 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 KLHL7Q8IXQ5 586 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 RTP4Q96DX8 246 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 FCRL5Q96RD9 977 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 FAM126AQ9BYI3 521 aaPredicted RBP21.48■■□□□ 1.03
CASC4-204ENST00000557945 DDX47Q9H0S4 455 aaKnown RBP21.48■■□□□ 1.03
CASC4-204ENST00000557945 UBP1Q9NZI7 540 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 USP36Q9P275 1121 aaKnown RBP21.48■■□□□ 1.03
CASC4-204ENST00000557945 SERGEFQ9UGK8 458 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 INVSQ9Y283 1065 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 C16orf96A6NNT2 1141 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 ZNF500O60304 480 aaPredicted RBP21.47■■□□□ 1.03
CASC4-204ENST00000557945 SOCS5O75159 536 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 ZSCAN5DPP0CG00 497 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 C7P10643 843 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 ETS1P14921 441 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 CA4P22748 312 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 PSMB4P28070 264 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 DRD3P35462 400 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 FNTAP49354 379 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 CKAP4Q07065 602 aaKnown RBP21.47■■□□□ 1.03
CASC4-204ENST00000557945 PRPSAP1Q14558 356 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 PCSK7Q16549 785 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 ZNF528Q3MIS6 628 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 FBXL19Q6PCT2 694 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 ERN2Q76MJ5 926 aaKnown RBP21.47■■□□□ 1.03
CASC4-204ENST00000557945 PARS2Q7L3T8 475 aaKnown RBP21.47■■□□□ 1.03
CASC4-204ENST00000557945 PRPF39Q86UA1 669 aaKnown RBP21.47■■□□□ 1.03
CASC4-204ENST00000557945 KBTBD6Q86V97 674 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 TAB3Q8N5C8 712 aaPredicted RBP21.47■■□□□ 1.03
CASC4-204ENST00000557945 NEUROG2Q9H2A3 272 aa21.47■■□□□ 1.03
CASC4-204ENST00000557945 ZNF318Q5VUA4 2279 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 CCDC188H7C350 402 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 PMPCBO75439 489 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 MT-CYBP00156 380 aaPredicted RBP21.46■■□□□ 1.03
CASC4-204ENST00000557945 XPAP23025 273 aaPredicted RBP21.46■■□□□ 1.03
CASC4-204ENST00000557945 NEK3P51956 506 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 CCDC15Q0P6D6 951 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 IHHQ14623 411 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 USP30Q70CQ3 517 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 TTC7BQ86TV6 843 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 GLIS1Q8NBF1 620 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 GRK7Q8WTQ7 553 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 HDAC8Q9BY41 377 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 DKK3Q9UBP4 350 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 FAM153AQ9UHL3 310 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 FEZ2Q9UHY8 353 aaPredicted RBP21.46■■□□□ 1.03
CASC4-204ENST00000557945 CHKBQ9Y259 395 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 PCDHB9Q9Y5E1 797 aa21.46■■□□□ 1.03
CASC4-204ENST00000557945 TRAFD1O14545 582 aaPredicted RBP21.45■■□□□ 1.02
CASC4-204ENST00000557945 HTRA2O43464 458 aaPredicted RBP21.45■■□□□ 1.02
CASC4-204ENST00000557945 ANXA9O76027 345 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 METTL18O95568 372 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 OXTRP30559 389 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 P2RY2P41231 377 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 TUBB2AQ13885 445 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 TRIP13Q15645 432 aaPredicted RBP21.45■■□□□ 1.02
CASC4-204ENST00000557945 KCTD19Q17RG1 926 aaPredicted RBP21.45■■□□□ 1.02
CASC4-204ENST00000557945 WHAMMP3Q1A5X7 153 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 PARP6Q2NL67 630 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 MAP7D1Q3KQU3 841 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 DNTTIP2Q5QJE6 756 aaKnown RBP21.45■■□□□ 1.02
CASC4-204ENST00000557945 ARMC12Q5T9G4 340 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 FAXCQ5TGI0 409 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 BRAT1Q6PJG6 821 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 KDELC2Q7Z4H8 507 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 FAM160A2Q8N612 972 aaPredicted RBP21.45■■□□□ 1.02
CASC4-204ENST00000557945 SPATA4Q8NEY3 305 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 HCAR2Q8TDS4 363 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 SPACA7Q96KW9 195 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 TUBB2BQ9BVA1 445 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 TDRD1Q9BXT4 1180 aaKnown RBP21.45■■□□□ 1.02
CASC4-204ENST00000557945 ZSCAN32Q9NX65 697 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 PAK5Q9P286 719 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 FZD4Q9ULV1 537 aa21.45■■□□□ 1.02
CASC4-204ENST00000557945 IGHV1OR15-9A0A0B4J2B8 117 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 PGLSO95336 258 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 CPP00450 1065 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 ADRB3P13945 408 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 TIMP2P16035 220 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms