RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ARL15Q9NXU5 204 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 PLK2Q9NYY3 685 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 AMFRQ9UKV5 643 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 EXO1Q9UQ84 846 aaKnown RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 B3GNT3Q9Y2A9 372 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 REXO2Q9Y3B8 237 aaKnown RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 CMAHPQ9Y471 501 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 GPR75-ASB3A0A0A6YYF3 556 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 CCDC188H7C350 402 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 MPHOSPH10O00566 681 aaKnown RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 CAPN9O14815 690 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 TXNL1O43396 289 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 PRAMEF2O60811 474 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ZC3H11AO75152 810 aaKnown RBP eCLIP3.91□□□□□ -1.78
TDP1-217ENST00000557782 GPC4O75487 556 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 CNTN5O94779 1100 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 NKX2-2O95096 273 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 NXPH3O95157 252 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 SIX3O95343 332 aaPredicted RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 GUCA1CO95843 209 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 IL1AP01583 271 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 TFP02787 698 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ZNF182P17025 639 aaPredicted RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 KRT4P19013 534 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 TGM2P21980 687 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 IL10P22301 178 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 NDUFS1P28331 727 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 TYK2P29597 1187 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 STAT6P42226 847 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 MTHFRP42898 656 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 NT5C2P49902 561 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 POLR2FP61218 127 aaKnown RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 TUBB4BP68371 445 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 GPC5P78333 572 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 HHEXQ03014 270 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 C17orf67Q0P5P2 114 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 RALGDSQ12967 914 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 KCNC3Q14003 757 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 SEMA3AQ14563 771 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ANKRD20A4Q4UJ75 823 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 GLE1Q53GS7 698 aaKnown RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 ANKRD20A8PQ5CZ79 823 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ZRANB3Q5FWF4 1079 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ANKRD20A2Q5SQ80 823 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ANKRD20A1Q5TYW2 823 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ANKRD20A3Q5VUR7 823 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 B3GNTL1Q67FW5 361 aaPredicted RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 CFAP77Q6ZQR2 320 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 LRRC55Q6ZSA7 311 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ZNF551Q7Z340 670 aaPredicted RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 GDF7Q7Z4P5 450 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 HOOK3Q86VS8 718 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ZNF761Q86XN6 746 aaPredicted RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 PEX5LQ8IYB4 626 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ABI1Q8IZP0 508 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 C12orf76Q8N812 135 aaPredicted RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 ATAD1Q8NBU5 361 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 CHST13Q8NET6 341 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 GDPD5Q8WTR4 605 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 PTPMT1Q8WUK0 201 aaPredicted RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 TEKT4Q8WW24 435 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 LPGAT1Q92604 370 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 FKBP10Q96AY3 582 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 PPP1R13BQ96KQ4 1090 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 TMEM68Q96MH6 324 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 GPR78Q96P69 363 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 SNX18Q96RF0 628 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 BBS4Q96RK4 519 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 IWS1Q96ST2 819 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 MNTQ99583 582 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 EGFL8Q99944 293 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 SYT17Q9BSW7 474 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ABHD14AQ9BUJ0 271 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ALG8Q9BVK2 526 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 IFT27Q9BW83 186 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ADGRE3Q9BY15 652 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 C1orf21Q9H246 121 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 NRIP3Q9NQ35 241 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 TMEM74BQ9NUR3 256 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 TMEM248Q9NWD8 314 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 FAM53CQ9NYF3 392 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 GDE1Q9NZC3 331 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 TRPM5Q9NZQ8 1165 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 CWC15Q9P013 229 aaKnown RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 CTNNAL1Q9UBT7 734 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 CNOT8Q9UFF9 292 aaKnown RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 FBXO40Q9UH90 709 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 XPO7Q9UIA9 1087 aaKnown RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 SH3BGRL2Q9UJC5 107 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 LEF1Q9UJU2 399 aaPredicted RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 GABRQQ9UN88 632 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 FAM96BQ9Y3D0 163 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 ATP6V0A2Q9Y487 856 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 CLDN16Q9Y5I7 305 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 MAU2Q9Y6X3 613 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 UTYO14607 1347 aa3.91□□□□□ -1.78
TDP1-217ENST00000557782 SPAG9O60271 1321 aaKnown RBP3.91□□□□□ -1.78
TDP1-217ENST00000557782 EDDM13A0A1B0GTR0 161 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 A0A1W2PRV1 198 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 ZNF503-AS2A6NEH8 195 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms