RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 ANKMY1Q9P2S6 941 aa18.6■□□□□ 0.57
ABCD4-228ENST00000557588 DOLKQ9UPQ8 538 aa18.6■□□□□ 0.57
ABCD4-228ENST00000557588 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.6■□□□□ 0.57
ABCD4-228ENST00000557588 PRAMEF33A0A0G2JMD5 474 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 PRAMEF10O60809 474 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 GNA14O95837 355 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 GSRP00390 522 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 WT1P19544 449 aaPredicted RBP18.59■□□□□ 0.57
ABCD4-228ENST00000557588 GKP32189 559 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 HK3P52790 923 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 DEUP1Q05D60 604 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 GJB7Q6PEY0 223 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 TRIM65Q6PJ69 517 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 VASH2Q86V25 355 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 DTX1Q86Y01 620 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 ZSCAN1Q8NBB4 408 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 OR6C4Q8NGE1 309 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 SHC3Q92529 594 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 EPAS1Q99814 870 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 EDEM3Q9BZQ6 932 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 ZYG11BQ9C0D3 744 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 LRRN3Q9H3W5 708 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 SYNCQ9H7C4 482 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 MBNL1Q9NR56 388 aaKnown RBP18.59■□□□□ 0.57
ABCD4-228ENST00000557588 GEMIN8Q9NWZ8 242 aaKnown RBP18.59■□□□□ 0.57
ABCD4-228ENST00000557588 ATP6V1DQ9Y5K8 247 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 ACTL7AQ9Y615 435 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 TEX15Q9BXT5 2789 aa18.59■□□□□ 0.57
ABCD4-228ENST00000557588 TM7SF2O76062 418 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 UGT2B4P06133 528 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 ITIH1P19827 911 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 PEX5P50542 639 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 ALG11Q2TAA5 492 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 SLC25A52Q3SY17 297 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 SMYD5Q6GMV2 418 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 OR2AP1Q8NGE2 309 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 HTR3CQ8WXA8 447 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 ARHGEF2Q92974 986 aaKnown RBP18.58■□□□□ 0.56
ABCD4-228ENST00000557588 HAPLN3Q96S86 360 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 TBCBQ99426 244 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 SLC25A18Q9H1K4 315 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 GDPD2Q9HCC8 539 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 FOXJ2Q9P0K8 574 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 GPR34Q9UPC5 381 aa18.58■□□□□ 0.56
ABCD4-228ENST00000557588 A0A1W2PQC6 194 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 BICDL2A1A5D9 508 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 KRIT1O00522 736 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 SRGAP2O75044 1071 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 RASGRP1O95267 797 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 CD82P27701 267 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 SCNN1AP37088 669 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 ETFBP38117 255 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 USP8P40818 1118 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 GEMIN4P57678 1058 aaKnown RBP18.57■□□□□ 0.56
ABCD4-228ENST00000557588 ZFP36L1Q07352 338 aaKnown RBP18.57■□□□□ 0.56
ABCD4-228ENST00000557588 CLCA4Q14CN2 919 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 IRF4Q15306 451 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 KLHL10Q6JEL2 608 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 BNIPLQ7Z465 357 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 CCNJLQ8IV13 435 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 DRC7Q8IY82 874 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 RYBPQ8N488 228 aaPredicted RBP18.57■□□□□ 0.56
ABCD4-228ENST00000557588 NELFBQ8WX92 580 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 PPARGC1AQ9UBK2 798 aaKnown RBP18.57■□□□□ 0.56
ABCD4-228ENST00000557588 APEX2Q9UBZ4 518 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 APPL1Q9UKG1 709 aa18.57■□□□□ 0.56
ABCD4-228ENST00000557588 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.56■□□□□ 0.56
ABCD4-228ENST00000557588 MMP20O60882 483 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 ACVRL1P37023 503 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 ETV5P41161 510 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 SNRPD1P62314 119 aaKnown RBP18.56■□□□□ 0.56
ABCD4-228ENST00000557588 MORC3Q14149 939 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 POLD3Q15054 466 aaPredicted RBP18.56■□□□□ 0.56
ABCD4-228ENST00000557588 ARHGAP44Q17R89 818 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 LRRC73Q5JTD7 316 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 ZFAND4Q86XD8 727 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 GKN2Q86XP6 184 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 HID1Q8IV36 788 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 GPR156Q8NFN8 814 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 CXorf40AQ8TE69 158 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 KLHL32Q96NJ5 620 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 B3GNT4Q9C0J1 378 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 ADNPQ9H2P0 1102 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 SEPT3Q9UH03 358 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 HOOK1Q9UJC3 728 aaKnown RBP18.56■□□□□ 0.56
ABCD4-228ENST00000557588 MAN1B1Q9UKM7 699 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 CTNND2Q9UQB3 1225 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 PCDHB11Q9Y5F2 797 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 LRRK1Q38SD2 2015 aa18.56■□□□□ 0.56
ABCD4-228ENST00000557588 UNC13CQ8NB66 2214 aa18.55■□□□□ 0.56
ABCD4-228ENST00000557588 TMEM110-MUSTN1A8MSY1 372 aa18.55■□□□□ 0.56
ABCD4-228ENST00000557588 PPP1R3GB7ZBB8 358 aa18.55■□□□□ 0.56
ABCD4-228ENST00000557588 C9orf172C9J069 976 aa18.55■□□□□ 0.56
ABCD4-228ENST00000557588 POP4O95707 220 aaKnown RBP18.55■□□□□ 0.56
ABCD4-228ENST00000557588 CTSEP14091 401 aa18.55■□□□□ 0.56
ABCD4-228ENST00000557588 RNASE9P60153 205 aaKnown RBP18.55■□□□□ 0.56
ABCD4-228ENST00000557588 CYP4F2P78329 520 aa18.55■□□□□ 0.56
ABCD4-228ENST00000557588 PTK2Q05397 1052 aa18.55■□□□□ 0.56
ABCD4-228ENST00000557588 NFATC4Q14934 902 aa18.55■□□□□ 0.56
ABCD4-228ENST00000557588 KLHL40Q2TBA0 621 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms