RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 NKAIN2Q5VXU1 208 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 PAPD7Q5XG87 772 aaKnown RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 ARL6IP4Q66PJ3 421 aaKnown RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 RAP1GAP2Q684P5 730 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 CXorf57Q6NSI4 855 aaKnown RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 PARS2Q7L3T8 475 aaKnown RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 CHSY1Q86X52 802 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 CCAR2Q8N163 923 aaKnown RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 CISD2Q8N5K1 135 aaKnown RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 ESX1Q8N693 406 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 TATDN2Q93075 761 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 PNPLA2Q96AD5 504 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 ALG14Q96F25 216 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 PDXPQ96GD0 296 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 CCDC114Q96M63 670 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 UBXN6Q9BZV1 441 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 APMAPQ9HDC9 416 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 MBNL1Q9NR56 388 aaKnown RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 AGPAT3Q9NRZ7 376 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 COPG2Q9UBF2 871 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 IL36AQ9UHA7 158 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 FRMD3A2A2Y4 597 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 PIPSLA2A3N6 862 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 TMEM200CA6NKL6 621 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 LRRIQ3A6PVS8 624 aaPredicted RBP9.53□□□□□ -0.88
NEDD1-211ENST00000557454 K7ERQ8 282 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 AP1G1O43747 822 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 DPM1O60762 260 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 KATNA1O75449 491 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 TACR2P21452 398 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 RRM1P23921 792 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 NFKBIAP25963 317 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 CCL11P51671 97 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 PLK1P53350 603 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 SRP54P61011 504 aaKnown RBP9.53□□□□□ -0.88
NEDD1-211ENST00000557454 CENPCQ03188 943 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 CLPPQ16740 277 aaPredicted RBP9.53□□□□□ -0.88
NEDD1-211ENST00000557454 SGSM1Q2NKQ1 1148 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 SPECC1LQ69YQ0 1117 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 ENPP7Q6UWV6 458 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 CEACAM20Q6UY09 585 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 ZNF517Q6ZMY9 492 aaPredicted RBP9.53□□□□□ -0.88
NEDD1-211ENST00000557454 TAF8Q7Z7C8 310 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 ZSCAN30Q86W11 494 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 ZNF295-AS1Q8N0V1 137 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 RBMXL3Q8N7X1 1067 aaKnown RBP9.53□□□□□ -0.88
NEDD1-211ENST00000557454 XXYLT1Q8NBI6 393 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 OR4D9Q8NGE8 314 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 OR52K2Q8NGK3 314 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 ASB12Q8WXK4 309 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 RBM15Q96T37 977 aaKnown RBP eCLIP9.53□□□□□ -0.88
NEDD1-211ENST00000557454 TNKS2Q9H2K2 1166 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 DPEP2Q9H4A9 486 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 LRRC4Q9HBW1 653 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 KLQ9UEF7 1012 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 ZNF451Q9Y4E5 1061 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 WASF2Q9Y6W5 498 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 ATRQ13535 2644 aa9.53□□□□□ -0.88
NEDD1-211ENST00000557454 FN1P02751 2386 aaKnown RBP9.53□□□□□ -0.88
NEDD1-211ENST00000557454 COL6A5A8TX70 2615 aa9.52□□□□□ -0.88
NEDD1-211ENST00000557454 RHPN2P1A8MT19 583 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 NEMP1O14524 444 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 EIF3DO15371 548 aaKnown RBP eCLIP9.52□□□□□ -0.89
NEDD1-211ENST00000557454 TGFB1I1O43294 461 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 MAP3K6O95382 1288 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 ASS1P00966 412 aaKnown RBP9.52□□□□□ -0.89
NEDD1-211ENST00000557454 BPIP17213 487 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 MAN1A1P33908 653 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 ABL2P42684 1182 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 NOP2P46087 812 aaKnown RBP9.52□□□□□ -0.89
NEDD1-211ENST00000557454 MC2RQ01718 297 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 CHRNA6Q15825 494 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 MIIPQ5JXC2 388 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 DPY19L3Q6ZPD9 716 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 TAOK1Q7L7X3 1001 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 IQCKQ8N0W5 287 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 SIX6OS1Q8N1H7 587 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 ATP11CQ8NB49 1132 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 FEM1AQ9BSK4 669 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 ZMYND15Q9H091 742 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 GSX1Q9H4S2 264 aaPredicted RBP9.52□□□□□ -0.89
NEDD1-211ENST00000557454 PANK4Q9NVE7 773 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 VPS28Q9UK41 221 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 OSGIN2Q9Y236 505 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 HS3ST2Q9Y278 367 aa9.52□□□□□ -0.89
NEDD1-211ENST00000557454 TCAF2A6NFQ2 919 aa9.51□□□□□ -0.89
NEDD1-211ENST00000557454 EPB41L2O43491 1005 aaKnown RBP9.51□□□□□ -0.89
NEDD1-211ENST00000557454 SMAD6O43541 496 aaKnown RBP9.51□□□□□ -0.89
NEDD1-211ENST00000557454 TSPAN6O43657 245 aa9.51□□□□□ -0.89
NEDD1-211ENST00000557454 SNAP91O60641 907 aa9.51□□□□□ -0.89
NEDD1-211ENST00000557454 EIF5BO60841 1220 aaKnown RBP9.51□□□□□ -0.89
NEDD1-211ENST00000557454 CREG1O75629 220 aa9.51□□□□□ -0.89
NEDD1-211ENST00000557454 ENDOD1O94919 500 aa9.51□□□□□ -0.89
NEDD1-211ENST00000557454 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
NEDD1-211ENST00000557454 HNRNPH3P31942 346 aaKnown RBP9.51□□□□□ -0.89
NEDD1-211ENST00000557454 L1CAMP32004 1257 aa9.51□□□□□ -0.89
NEDD1-211ENST00000557454 AP3M2P53677 418 aa9.51□□□□□ -0.89
NEDD1-211ENST00000557454 SLC8A3P57103 927 aa9.51□□□□□ -0.89
NEDD1-211ENST00000557454 DAOAP59103 153 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms