RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 SBK3P0C264 359 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 ERVK-10P10266 1014 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
APEX1-216ENST00000557159 DNAJB2P25686 324 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 HOXD10P28358 340 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 GNL1P36915 607 aaPredicted RBP12.68□□□□□ -0.38
APEX1-216ENST00000557159 FLT3LGP49771 235 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 CCR3P51677 355 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 BMXP51813 675 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 CDH15P55291 814 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 SESN2P58004 480 aaPredicted RBP12.68□□□□□ -0.38
APEX1-216ENST00000557159 DNAJB13P59910 316 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 RAB39AQ14964 217 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 KYAT1Q16773 422 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 AARS2Q5JTZ9 985 aaKnown RBP12.68□□□□□ -0.38
APEX1-216ENST00000557159 ZNF484Q5JVG2 852 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 C16orf87Q6PH81 154 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 ABRAXAS1Q6UWZ7 409 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 SPRED1Q7Z699 444 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 SIX6OS1Q8N1H7 587 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 RNF148Q8N7C7 305 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 RNF149Q8NC42 400 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
APEX1-216ENST00000557159 ROPN1LQ96C74 230 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 FEM1CQ96JP0 617 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 ZNF641Q96N77 438 aaPredicted RBP12.68□□□□□ -0.38
APEX1-216ENST00000557159 TSNARE1Q96NA8 513 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 CSPG4P5Q96PW8 444 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 NPAS2Q99743 824 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 PSD2Q9BQI7 771 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 SLC25A23Q9BV35 468 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 TRIM15Q9C019 465 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 SNX25Q9H3E2 840 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 FZD8Q9H461 694 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 NOL11Q9H8H0 719 aaKnown RBP12.68□□□□□ -0.38
APEX1-216ENST00000557159 NGRNQ9NPE2 291 aaKnown RBP12.68□□□□□ -0.38
APEX1-216ENST00000557159 SMOXQ9NWM0 555 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 GPATCH2LQ9NWQ4 482 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 SRRDQ9UH36 339 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 GABRQQ9UN88 632 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 GPC6Q9Y625 555 aaPredicted RBP12.68□□□□□ -0.38
APEX1-216ENST00000557159 ZSWIM8A7E2V4 1837 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 PLXNB2O15031 1838 aa12.68□□□□□ -0.38
APEX1-216ENST00000557159 FNDC1Q4ZHG4 1894 aaPredicted RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 ZCWPW2A0A1B0GU75 182 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 RBM47A0AV96 593 aaKnown RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 PRORSD1PA6NEY8 169 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 SOCS2O14508 198 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 NOL3O60936 208 aaKnown RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 RAP1GAPP47736 663 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 TMED10P49755 219 aaKnown RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 LBX1P52954 281 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 PRKCZQ05513 592 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 ATP6AP1Q15904 470 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 CDO1Q16878 200 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 PKDCCQ504Y2 493 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 GLRA4Q5JXX5 417 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 PIWIL4Q7Z3Z4 852 aaKnown RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 DHFR2Q86XF0 187 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 ZNF786Q8N393 782 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 PCYOX1LQ8NBM8 494 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 LEMD2Q8NC56 503 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 NPLOC4Q8TAT6 608 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 TANKQ92844 425 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 ACDQ96AP0 544 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 FCRL3Q96P31 734 aaPredicted RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 DCUN1D5Q9BTE7 237 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 AGPAT4Q9NRZ5 378 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 ZNF236Q9UL36 1845 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 CASP8AP2Q9UKL3 1982 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 ZBTB42B2RXF5 422 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 CNOT3O75175 753 aaKnown RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 CSPG5O95196 566 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 RASAL1O95294 804 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 ARIH2O95376 493 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 PFKMP08237 780 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 FCGR1AP12314 374 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 HLCSP50747 726 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 CRADDP78560 199 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 GALNT1Q10472 559 aaPredicted RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 NFATC3Q12968 1075 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 PMS2P3Q13401 168 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 TMEM198Q66K66 360 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 REP15Q6BDI9 236 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 PRMT9Q6P2P2 845 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 USP51Q70EK9 711 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 OR13F1Q8NGS4 319 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 ZSCAN18Q8TBC5 510 aaPredicted RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 SNX27Q96L92 541 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 MROQ9BYG7 248 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 MUC13Q9H3R2 512 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 MEAF6Q9HAF1 191 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 VTA1Q9NP79 307 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 SPATA7Q9P0W8 599 aa12.67□□□□□ -0.38
APEX1-216ENST00000557159 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.67□□□□□ -0.38
APEX1-216ENST00000557159 TCAF1Q9Y4C2 921 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms