RNA–Protein interactions for RNA: ENST00000556609.5

EFCAB11-211, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3 BASIC

Gene EFCAB11, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-211ENST00000556609 BRAT1Q6PJG6 821 aa18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 BTN2A2Q8WVV5 523 aa18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 SNRNP25Q9BV90 132 aaKnown RBP18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 KLC2Q9H0B6 622 aa18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 DNAJC28Q9NX36 388 aa18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 NLGN3Q9NZ94 848 aa18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 CSNK1G3Q9Y6M4 447 aa18.01■□□□□ 0.47
EFCAB11-211ENST00000556609 POM121BA6NF01 834 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 SCAMP1O15126 338 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 ATMINO43313 823 aaPredicted RBP18■□□□□ 0.47
EFCAB11-211ENST00000556609 SIGLEC6O43699 453 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 PALMO75781 387 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 SERPING1P05155 500 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 TPM3P06753 285 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 SKILP12757 684 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 NME1P15531 152 aaKnown RBP18■□□□□ 0.47
EFCAB11-211ENST00000556609 TIMP2P16035 220 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 PAPOLAP51003 745 aaKnown RBP18■□□□□ 0.47
EFCAB11-211ENST00000556609 RENBPP51606 427 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 PFN3P60673 137 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 DAB2P98082 770 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 PIGHQ14442 188 aaPredicted RBP18■□□□□ 0.47
EFCAB11-211ENST00000556609 TMEM52BQ4KMG9 183 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 TDRD12Q587J7 1177 aaKnown RBP18■□□□□ 0.47
EFCAB11-211ENST00000556609 PPP6R3Q5H9R7 873 aaPredicted RBP18■□□□□ 0.47
EFCAB11-211ENST00000556609 AFMIDQ63HM1 303 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 SLC22A18ASQ8N1D0 253 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 ARFGAP1Q8N6T3 406 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 FAM181AQ8N9Y4 354 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 RFFLQ8WZ73 363 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 CENPTQ96BT3 561 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 SLC39A8Q9C0K1 460 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 SUV39H2Q9H5I1 410 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 ATP13A3Q9H7F0 1226 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 PDFQ9HBH1 243 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 GPATCH2LQ9NWQ4 482 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 LHX3Q9UBR4 397 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 CAPN11Q9UMQ6 739 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 CHD6Q8TD26 2715 aa18■□□□□ 0.47
EFCAB11-211ENST00000556609 TSPAN11A1L157 253 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 TMEM110-MUSTN1A8MSY1 372 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 H3BRJ5 948 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 TRIM38O00635 465 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 RAD51BO15315 384 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 LRCH4O75427 683 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 CKMT1AP12532 417 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 ERCC2P18074 760 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 ARL4AP40617 200 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 THOP1P52888 689 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 POLR2LP62875 67 aaKnown RBP17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 IL10RBQ08334 325 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 CAMK2BQ13554 666 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 PDE1CQ14123 709 aaPredicted RBP17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 FZD2Q14332 565 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 E4F1Q66K89 784 aaPredicted RBP17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 LUZP1Q86V48 1076 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 VOPP1Q96AW1 172 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 CELF6Q96J87 481 aaKnown RBP17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 TBATAQ96M53 351 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 ZNF599Q96NL3 588 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 KCTD15Q96SI1 283 aaPredicted RBP17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 SP110Q9HB58 689 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 MYO1AQ9UBC5 1043 aa17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 LUC7L2Q9Y383 392 aaKnown RBP17.99■□□□□ 0.47
EFCAB11-211ENST00000556609 CFAP69A5D8W1 941 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 J3KR12 359 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 TAF4O00268 1085 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 MMP20O60882 483 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 GP1BAP07359 652 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 SERPINA4P29622 427 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 PBX1P40424 430 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 PEX5P50542 639 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 DPYSL2Q16555 572 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 CA9Q16790 459 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 UGP2Q16851 508 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 SKOR2Q2VWA4 1001 aaPredicted RBP17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 SRLQ86TD4 932 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 NXPE2Q96DL1 559 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 PEBP4Q96S96 227 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 CINPQ9BW66 212 aaPredicted RBP17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 UCKL1Q9NWZ5 548 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 SPASTQ9UBP0 616 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 IP6K2Q9UHH9 426 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 ITM2BQ9Y287 266 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 TMEM131Q92545 1883 aa17.98■□□□□ 0.47
EFCAB11-211ENST00000556609 A0A1W2PQ67 120 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 FAM149AA5PLN7 773 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 DFFAO00273 331 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 TPP1O14773 563 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 FFAR2O15552 330 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 SPINT1O43278 529 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 HSPA9P38646 679 aaKnown RBP17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 DPYSQ14117 519 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 HES3Q5TGS1 186 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 HGSNATQ68CP4 663 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 BBS5Q8N3I7 341 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 NIPA2Q8N8Q9 360 aa17.97■□□□□ 0.47
EFCAB11-211ENST00000556609 ATL2Q8NHH9 583 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms