RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 RNF43Q68DV7 783 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 KYAT3Q6YP21 454 aaKnown RBP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 KREMEN2Q8NCW0 462 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 PTCD2Q8WV60 388 aaKnown RBP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 C20orf27Q9GZN8 174 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 MRM3Q9HC36 420 aaKnown RBP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 HCFC1R1Q9NWW0 138 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 PLK2Q9NYY3 685 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 SIRPGQ9P1W8 387 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 SEPT3Q9UH03 358 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 RANBP2P49792 3224 aaKnown RBP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 C2orf71A6NGG8 1288 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 GREM1O60565 184 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 SERPINF2P08697 491 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 TROVE2P10155 538 aaKnown RBP eCLIP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 KITP10721 976 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 ALDH3A1P30838 453 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 TMEM240Q5SV17 173 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 CHST9Q7L1S5 443 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 PTAR1Q7Z6K3 402 aaPredicted RBP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 OR13J1Q8NGT2 312 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 PPP1R14CQ8TAE6 165 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 WFDC5Q8TCV5 224 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 MRPS31Q92665 395 aaKnown RBP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 ZNF599Q96NL3 588 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 FBXO6Q9NRD1 293 aaPredicted RBP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 CHKBQ9Y259 395 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 TBC1D30Q9Y2I9 924 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 ARL5AQ9Y689 179 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 CCDC189A1A4V9 331 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 OR51F1A6NGY5 319 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 DNAJC6O75061 913 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 HAUS5O94927 633 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 DNAJB1P25685 340 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 CTNNB1P35222 781 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 MAGEA12P43365 314 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 ARSDP51689 593 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 CREMQ03060 361 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 ACTN3Q08043 901 aaPredicted RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 CYTH1Q15438 398 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 LACTB2Q53H82 288 aaPredicted RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 ZNF789Q5FWF6 425 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 NEPROQ6NW34 567 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 LILRA6Q6PI73 481 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 SETD3Q86TU7 594 aaPredicted RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 LDB1Q86U70 411 aaPredicted RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 TMC8Q8IU68 726 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 MFSD6LQ8IWD5 586 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 BBS5Q8N3I7 341 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 OR6P1Q8NGX9 317 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 CLP1Q92989 425 aaKnown RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 TMA16Q96EY4 203 aaKnown RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 SMIM14Q96QK8 99 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 DDX50Q9BQ39 737 aaKnown RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 MGME1Q9BQP7 344 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 PRKD2Q9BZL6 878 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 RHOJQ9H4E5 214 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 SUDS3Q9H7L9 328 aaPredicted RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 MARCOQ9UEW3 520 aaPredicted RBP18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 MIA3Q5JRA6 1907 aa18.47■□□□□ 0.55
SDR39U1-220ENST00000556548 TLL1O43897 1013 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 PROCP04070 461 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 ADH1AP07327 375 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 ARF5P84085 180 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 KIAA0930Q6ICG6 404 aaPredicted RBP18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 C10orf107Q8IVU9 208 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 GPR22Q99680 433 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 ACE2Q9BYF1 805 aaPredicted RBP18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 TRIM55Q9BYV6 548 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 UNKQ9C0B0 810 aaKnown RBP18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 NSMCE4AQ9NXX6 385 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 CFAP97Q9P2B7 532 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 USH1CQ9Y6N9 552 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 CARNS1A5YM72 827 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 ATG16L1Q676U5 607 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 TPGS1Q6ZTW0 290 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 CNTN4Q8IWV2 1026 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 SPATA6LQ8N4H0 392 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 MICAL1Q8TDZ2 1067 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 HDAC10Q969S8 669 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 ISL2Q96A47 359 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 PSKH2Q96QS6 385 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 PLCD4Q9BRC7 762 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 LRRC3Q9BY71 257 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 VPS28Q9UK41 221 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 FBXO5Q9UKT4 447 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 SSX2IPQ9Y2D8 614 aa18.46■□□□□ 0.55
SDR39U1-220ENST00000556548 PCLAFQ15004 111 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 CNSTQ6PJW8 725 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 EGFL6Q8IUX8 553 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 C7orf61Q8IZ16 206 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 DDI1Q8WTU0 396 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 MYLK2Q9H1R3 596 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 SCUBE2Q9NQ36 999 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 CPSF2Q9P2I0 782 aaKnown RBP18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 STOML2Q9UJZ1 356 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 ASB3Q9Y575 518 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 PCDHGC4Q9Y5F7 938 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 CHD9Q3L8U1 2897 aa18.45■□□□□ 0.54
SDR39U1-220ENST00000556548 FAM95CA0A1B0GW59 222 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms