RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 CDY2AQ9Y6F7 541 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 TEX264Q9Y6I9 313 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 A6NHS1 94 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF487B1APH4 448 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 TNPO2O14787 897 aaKnown RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 XPO1O14980 1071 aaKnown RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 TYROBPO43914 113 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ICMTO60725 284 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 NIPSNAP2O75323 286 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 AVILO75366 819 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 DNAJB5O75953 348 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 PGK1P00558 417 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 PGRP06401 933 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 CSF2RAP15509 400 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 RBL1P28749 1068 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 NDUFV1P49821 464 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 RABGGTBP53611 331 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 CACNA2D1P54289 1103 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 MRPS6P82932 125 aaKnown RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 IL1RL1Q01638 556 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 SULT2A1Q06520 285 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 MGAT3Q09327 533 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ADIGQ0VDE8 80 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 TRAP1Q12931 704 aaKnown RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 TRIM32Q13049 653 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 EFR3AQ14156 821 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 MMEL1Q495T6 779 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 SV2CQ496J9 727 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 FAM47CQ5HY64 1035 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 WSCD1Q658N2 575 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 RGMBQ6NW40 437 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 TAF2Q6P1X5 1199 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ERICH5Q6P6B1 374 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 CLEC2AQ6UVW9 174 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 C4orf22Q6V702 233 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF534Q76KX8 674 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 PYROXD2Q8N2H3 581 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 FAM26EQ8N5C1 309 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF366Q8N895 744 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 FBXO36Q8NEA4 188 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ASZ1Q8WWH4 475 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 CKAP2Q8WWK9 683 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ZC3H10Q96K80 434 aaKnown RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ANKRD27Q96NW4 1050 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 KCTD15Q96SI1 283 aaPredicted RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 AP5M1Q9H0R1 490 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ACSS3Q9H6R3 686 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 CAAP1Q9H8G2 361 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 AGO3Q9H9G7 860 aaKnown RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 MRM3Q9HC36 420 aaKnown RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 CRTAC1Q9NQ79 661 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 FAM105AQ9NUU6 356 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ETNK2Q9NVF9 386 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 PPP1R14DQ9NXH3 145 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 GABRQQ9UN88 632 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 ST3GAL5Q9UNP4 418 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 DMTF1Q9Y222 760 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 RPH3AQ9Y2J0 694 aaPredicted RBP5.15□□□□□ -1.58
TMEM260-210ENST00000556422 PCDHGA2Q9Y5H1 932 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 VWA8A3KMH1 1905 aa5.15□□□□□ -1.58
TMEM260-210ENST00000556422 A0A1W2PPM1 405 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 BCLAF3A2AJT9 711 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 WDR91A4D1P6 747 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 DNM1LO00429 736 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 SEMA3DO95025 777 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 ASMTLO95671 621 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CTRB1P17538 263 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 TGM2P21980 687 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CYP2F1P24903 491 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CLCNKBP51801 687 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 TFDP2Q14188 446 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 TRIM25Q14258 630 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CTC1Q2NKJ3 1217 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 VARS2Q5ST30 1063 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 NCBP2-AS2Q69YL0 99 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CTRB2Q6GPI1 263 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 LIN54Q6MZP7 749 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 TTC23LQ6PF05 361 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 PLEKHM3Q6ZWE6 761 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 VASH1Q7L8A9 365 aaPredicted RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 SLC51BQ86UW2 128 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 SERINC5Q86VE9 423 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 LONP2Q86WA8 852 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 ZMIZ2Q8NF64 920 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 STARD8Q92502 1023 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 LPPQ93052 612 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 HSFY1Q96LI6 401 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 CSPG4P5Q96PW8 444 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 SECISBP2Q96T21 854 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 MLPHQ9BV36 600 aaPredicted RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 DUSP16Q9BY84 665 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 LIN28AQ9H9Z2 209 aaKnown RBP5.15□□□□□ -1.59
TMEM260-210ENST00000556422 NEUROD4Q9HD90 331 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 ANLNQ9NQW6 1124 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 NR2E3Q9Y5X4 410 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 KRT87PA6NCN2 255 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 POC1B-GALNT4F8VUJ3 575 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 KCNN4O15554 427 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 IDH3BO43837 385 aa5.15□□□□□ -1.59
TMEM260-210ENST00000556422 SNX3O60493 162 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms