RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 RFPL3O75679 317 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 URI1O94763 535 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 CLSTN1O94985 981 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 SP9P0CG40 484 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PNMA6AP0CW24 399 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 KCNE1P15382 129 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 CEBPBP17676 345 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 GDI1P31150 447 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PTPN7P35236 360 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 LONP1P36776 959 aaKnown RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PBX1P40424 430 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PRPHP41219 470 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TOB1P50616 345 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 CHN2P52757 468 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 STARD6P59095 220 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 RAP2BP61225 183 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 SLC20A2Q08357 652 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TWF1Q12792 350 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PNOCQ13519 176 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 BMT2Q1RMZ1 405 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TUBB8Q3ZCM7 444 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ARHGAP29Q52LW3 1261 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ARHGAP15Q53QZ3 475 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ATXN7L2Q5T6C5 722 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 GPR158Q5T848 1215 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TANGO2Q6ICL3 276 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF280DQ6N043 979 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 FOXR2Q6PJQ5 311 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ALKAL1Q6UXT8 129 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 FRMD7Q6ZUT3 714 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 C1orf186Q6ZWK4 172 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 DGLUCYQ7Z3D6 616 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 GPBP1Q86WP2 473 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 THEM5Q8N1Q8 247 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 C4orf32Q8N8J7 132 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TC2NQ8N9U0 490 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 BEST2Q8NFU1 509 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PJA1Q8NG27 643 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF480Q8WV37 535 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 EXOC4Q96A65 974 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TCEAL4Q96EI5 215 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 RNF31Q96EP0 1072 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ORAI3Q9BRQ5 295 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 MSTO1Q9BUK6 570 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 NUP58Q9BVL2 599 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PLA2G2FQ9BZM2 168 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 GPR88Q9GZN0 384 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 CDT1Q9H211 546 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 CUEDC2Q9H467 287 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 LMAN1LQ9HAT1 526 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PLEKHA5Q9HAU0 1116 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ASAH2Q9NR71 780 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 HEBP1Q9NRV9 189 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ZNHIT6Q9NWK9 470 aaKnown RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 CWC15Q9P013 229 aaKnown RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 LRIT1Q9P2V4 623 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 LIMA1Q9UHB6 759 aaKnown RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 AFF4Q9UHB7 1163 aaKnown RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PRSS50Q9UI38 385 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 RWDD2AQ9UIY3 292 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 CDC23Q9UJX2 597 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 RAB21Q9UL25 225 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 MTF2Q9Y483 593 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 INSL5Q9Y5Q6 135 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 MRFAP1Q9Y605 127 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 GVINP1Q7Z2Y8 2422 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 CEP250Q9BV73 2442 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 MYO18AQ92614 2054 aaKnown RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 SPAG17Q6Q759 2223 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 GPR179Q6PRD1 2367 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 WDR27A2RRH5 827 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 CTAGE9A4FU28 777 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 OR6C75A6NL08 312 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 K7ENM7 598 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MAP2K7O14733 419 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 HNRNPDLO14979 420 aaKnown RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ECI2O75521 394 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ABLIM3O94929 683 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 SEC24AO95486 1093 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 FGF19O95750 216 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 GASTP01350 101 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 EDN1P05305 212 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 IVLP07476 585 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 CXCL8P10145 99 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 EGR2P11161 476 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ATP1A3P13637 1013 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 GJA1P17302 382 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 EEF1GP26641 437 aaKnown RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 VIPR2P41587 438 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MAGEA9P43362 315 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 MANFP55145 182 aaKnown RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 GNG11P61952 73 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 PHC1P78364 1004 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 KRT83P78385 493 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 CDK17Q00537 523 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 ROR1Q01973 937 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 YWHAHQ04917 246 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-240ENST00000556339 PLD1Q13393 1074 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 STIM1Q13586 685 aa4.16□□□□□ -1.74
ATXN3-240ENST00000556339 CUL4BQ13620 913 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms