RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ZRSR2Q15696 482 aaKnown RBP3.35□□□□□ -1.87
SCFD1-218ENST00000556256 RINT1Q6NUQ1 792 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 GGT6Q6P531 493 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 NEK10Q6ZWH5 1172 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 RNF144BQ7Z419 303 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 WDR5BQ86VZ2 330 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 ANKRD42Q8N9B4 389 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 ATG16L2Q8NAA4 619 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 SPATA5Q8NB90 893 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 OR13A1Q8NGR1 328 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 GRAPLQ8TC17 118 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-218ENST00000556256 TRAPPC12Q8WVT3 735 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 RSC1A1Q92681 617 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 OR1F2PQ96R84 312 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 DACT1Q9NYF0 836 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 SMARCAL1Q9NZC9 954 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 NFU1Q9UMS0 254 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 GPR52Q9Y2T5 361 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 TMEM247A6NEH6 219 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 AGAP5A6NIR3 686 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 MBD3L5A6NJ08 208 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-218ENST00000556256 SLC38A8A6NNN8 435 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 J3KR12 359 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 CRLF1O75462 422 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 KDM4BO94953 1096 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 CLDN14O95500 239 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 ZNF10P21506 573 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-218ENST00000556256 DPP6P42658 865 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 FUT6P51993 359 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 SYT16Q17RD7 645 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 TRIM60Q495X7 471 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 TMEM268Q5VZI3 342 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 JMJD6Q6NYC1 403 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-218ENST00000556256 SUSD1Q6UWL2 747 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 LDHAL6AQ6ZMR3 332 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 GATAD2AQ86YP4 633 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 VPS52Q8N1B4 723 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 LYG1Q8N1E2 194 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 FAM76AQ8TAV0 307 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 OTUD7AQ8TE49 926 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-218ENST00000556256 PRPF18Q99633 342 aaKnown RBP3.34□□□□□ -1.87
SCFD1-218ENST00000556256 LITAFQ99732 161 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 IFT27Q9BW83 186 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 PRDM8Q9NQV8 689 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 LUZP4Q9P127 313 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 POU2F3Q9UKI9 436 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 PCDHGB3Q9Y5G1 929 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 PCDHA10Q9Y5I2 948 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 DGKBQ9Y6T7 804 aa3.34□□□□□ -1.87
SCFD1-218ENST00000556256 GREB1LQ9C091 1923 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-218ENST00000556256 IGKV6D-41A0A0C4DH26 115 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 A0A1W2PNU3 283 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-218ENST00000556256 FAM90A18PA6NE21 464 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 FAM90A16PA6NEW6 464 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 FAM90A9PA6NNJ1 464 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 FAM90A5PA8MXJ8 464 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 C16orf97H3BN30 126 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 IPO5O00410 1097 aaKnown RBP3.33□□□□□ -1.88
SCFD1-218ENST00000556256 CHL1O00533 1208 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 CREB3O43889 395 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 FAM90A15PP0C7V4 464 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 FAM90A14PP0C7W9 464 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 HSD17B4P51659 736 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 RCAN1P53805 252 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 LMO4P61968 165 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 POSTNQ15063 836 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 LPAL2Q16609 132 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 ARHGAP11AQ6P4F7 1023 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 AADATQ8N5Z0 425 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 MYRIPQ8NFW9 859 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 C2CD4CQ8TF44 421 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 CCT6BQ92526 530 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 TBC1D20Q96BZ9 403 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 EGFL8Q99944 293 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 TRIM31Q9BZY9 425 aa3.33□□□□□ -1.88
SCFD1-218ENST00000556256 PABPC3Q9H361 631 aaKnown RBP3.33□□□□□ -1.88
SCFD1-218ENST00000556256 HERC5Q9UII4 1024 aaKnown RBP3.33□□□□□ -1.88
SCFD1-218ENST00000556256 CACNA1FO60840 1977 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 hDV102S1A0JD36 115 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 DNPH1O43598 174 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 FAM155BO75949 473 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 ITGA2BP08514 1039 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 DHRS4L1P0CG22 281 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 GSTM2P28161 218 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 AKT1P31749 480 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 DCTDP32321 178 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 ALDH18A1P54886 795 aaKnown RBP3.32□□□□□ -1.88
SCFD1-218ENST00000556256 BRWD1-AS2P59051 145 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 SF3A3Q12874 501 aaKnown RBP eCLIP3.32□□□□□ -1.88
SCFD1-218ENST00000556256 TBC1D9BQ66K14 1250 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 NCAPH2Q6IBW4 605 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 SULT6B1Q6IMI4 303 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 NAPEPLDQ6IQ20 393 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 KLHL24Q6TFL4 600 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 SATL1Q86VE3 508 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 TMC8Q8IU68 726 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 SLC44A2Q8IWA5 706 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-218ENST00000556256 SUGP1Q8IWZ8 645 aaKnown RBP3.32□□□□□ -1.88
SCFD1-218ENST00000556256 NRSN1Q8IZ57 195 aa3.32□□□□□ -1.88
SCFD1-218ENST00000556256 GALNT15Q8N3T1 639 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms