RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 TSPAN11A1L157 253 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 RASA4BC9J798 803 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 LMO7DNF2Z398 122 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 TMX2-CTNND1H3BSU7 103 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 KRIT1O00522 736 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 EPHB6O15197 1021 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 RAD51BO15315 384 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 AQP9O43315 295 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 RASA4O43374 803 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 TLX3O43711 291 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 TMCC1O94876 653 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 UGT2B4P06133 528 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 HOXC4P09017 264 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 ATP1A3P13637 1013 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 HOXB3P14651 431 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 TIMP2P16035 220 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 JUNDP17535 347 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 TNFAIP3P21580 790 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 ABL2P42684 1182 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 HCAR3P49019 387 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 KLK7P49862 253 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 THOP1P52888 689 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 UCNP55089 124 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 POLR2LP62875 67 aaKnown RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 SEMG2Q02383 582 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 EIF2B5Q13144 721 aaKnown RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 COL9A2Q14055 689 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 PDE1CQ14123 709 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 RFTN1Q14699 578 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 STX1AQ16623 288 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 UGP2Q16851 508 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 PLEKHA7Q6IQ23 1121 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 DNAJC24Q6P3W2 148 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 SCYL2Q6P3W7 929 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 DCUN1D2Q6PH85 259 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 BRAT1Q6PJG6 821 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 APTXQ7Z2E3 356 aaKnown RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 IRF2BP2Q7Z5L9 587 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 PTAR1Q7Z6K3 402 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 DNAAF5Q86Y56 855 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 FSTL5Q8N475 847 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 LZTR1Q8N653 840 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 CCDC185Q8N715 623 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 ZNF248Q8NDW4 579 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 ZNF548Q8NEK5 533 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 OR6C4Q8NGE1 309 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 ATL2Q8NHH9 583 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 CXorf40AQ8TE69 158 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 SCG3Q8WXD2 468 aaKnown RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 SPOCK2Q92563 424 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 NAT6Q93015 286 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 WBP1Q96G27 269 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 PCMTD1Q96MG8 357 aaPredicted RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 MYOCQ99972 504 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 BOCQ9BWV1 1114 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 DPH1Q9BZG8 443 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 EDEM3Q9BZQ6 932 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 NAT10Q9H0A0 1025 aaKnown RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 SUV39H2Q9H5I1 410 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 LRRC19Q9H756 370 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 POLR1BQ9H9Y6 1135 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 FZD3Q9NPG1 666 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 PARVAQ9NVD7 372 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 SSUH2Q9Y2M2 353 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 PCDHGA8Q9Y5G5 932 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 U3KQA8 63 aa7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 SMG1Q96Q15 3661 aaKnown RBP7.88□□□□□ -1.15
PTCSC3-201ENST00000556013 ARHGAP42A6NI28 874 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 EIF4E1BA6NMX2 242 aaKnown RBP7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 SMTNL1A8MU46 457 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 SPINT1O43278 529 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 CCP110O43303 1012 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 CREB3O43889 395 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 BRINP1O60477 761 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 MBD3O95983 291 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 HTR1BP28222 390 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 GKP32189 559 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 EIF4A3P38919 411 aaKnown RBP7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 RHOAP61586 193 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 RPL7AP62424 266 aaKnown RBP7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 PPARDQ03181 441 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 MAMLD1Q13495 774 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 NCAPHQ15003 741 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 ELOCQ15369 112 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 CYTH1Q15438 398 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 NR0B2Q15466 257 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 ISXQ2M1V0 245 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 RAB6CQ53S08 254 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 C6orf132Q5T0Z8 1188 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 ERMARDQ5T6L9 678 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 ESRP1Q6NXG1 681 aaKnown RBP7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 MACC1Q6ZN28 852 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 GPR155Q7Z3F1 870 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 TMC6Q7Z403 805 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 ZNF354CQ86Y25 554 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 TP53I13Q8NBR0 393 aaPredicted RBP7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 MAPK15Q8TD08 544 aa7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 SNRNP27Q8WVK2 155 aaKnown RBP7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 CCDC97Q96F63 343 aaPredicted RBP7.87□□□□□ -1.15
PTCSC3-201ENST00000556013 HMCESQ96FZ2 354 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms