RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 BNC1Q01954 994 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 GFPT1Q06210 699 aaPredicted RBP3.98□□□□□ -1.77
LINC00648-202ENST00000555985 DYNC1I2Q13409 638 aaKnown RBP3.98□□□□□ -1.77
LINC00648-202ENST00000555985 DBN1Q16643 649 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 ANKRD20A2Q5SQ80 823 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 ANKRD20A1Q5TYW2 823 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 ANKRD20A3Q5VUR7 823 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 TXNRD3NBQ6F5E7 133 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 TBC1D1Q86TI0 1168 aaPredicted RBP3.98□□□□□ -1.77
LINC00648-202ENST00000555985 CPNE8Q86YQ8 564 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 TRIM42Q8IWZ5 723 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 CARNMT1Q8N4J0 409 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 OR2A12Q8NGT7 310 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 RAPGEF5Q92565 580 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 NAF1Q96HR8 494 aaKnown RBP3.98□□□□□ -1.77
LINC00648-202ENST00000555985 NSMCE3Q96MG7 304 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 SNRNP25Q9BV90 132 aaKnown RBP3.98□□□□□ -1.77
LINC00648-202ENST00000555985 PABPC3Q9H361 631 aaKnown RBP3.98□□□□□ -1.77
LINC00648-202ENST00000555985 NHEJ1Q9H9Q4 299 aaPredicted RBP3.98□□□□□ -1.77
LINC00648-202ENST00000555985 CAPN10Q9HC96 672 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 GPR27Q9NS67 375 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 PCMTD2Q9NV79 361 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 DLL3Q9NYJ7 618 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 CNOT8Q9UFF9 292 aaKnown RBP3.98□□□□□ -1.77
LINC00648-202ENST00000555985 SLCO3A1Q9UIG8 710 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 SARDHQ9UL12 918 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 FZD4Q9ULV1 537 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 SCML1Q9UN30 329 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 MFHAS1Q9Y4C4 1052 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 OTOGLQ3ZCN5 2332 aa3.98□□□□□ -1.77
LINC00648-202ENST00000555985 SPAG17Q6Q759 2223 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 UPK3BL1B0FP48 263 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 UPK3BL2E5RIL1 263 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 MCF2LO15068 1137 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 FGF10O15520 208 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SMAD6O43541 496 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 LATO43561 262 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 PLRG1O43660 514 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 KRT86O43790 486 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 ALDH1A2O94788 518 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 ATP5BP06576 529 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 FAM153BP0C7A2 387 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 HLA-EP13747 358 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 PRLRP16471 622 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 DRD4P21917 467 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 HPDP32754 393 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SERPINH1P50454 418 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SCNN1BP51168 640 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 NDST2P52849 883 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 METAP1P53582 386 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 TAS2R38P59533 333 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 MRPS25P82663 173 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 MRPS35P82673 323 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 GNA12Q03113 381 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SFSWAPQ12872 951 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SERINC3Q13530 473 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 CDH18Q13634 790 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SIM2Q14190 667 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 PIGHQ14442 188 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 MYBPC3Q14896 1274 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 TAF11Q15544 211 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 FAM153CQ494X1 144 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 USP39Q53GS9 565 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 C6orf118Q5T5N4 469 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 ERMARDQ5T6L9 678 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 AGBL4Q5VU57 503 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 RNF219Q5W0B1 726 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 ANO7Q6IWH7 933 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 ALKBH5Q6P6C2 394 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SLC23A3Q6PIS1 610 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 DBX2Q6ZNG2 339 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 POLNQ7Z5Q5 900 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 IFT20Q8IY31 132 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 CHPFQ8IZ52 775 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 NPWQ8N729 165 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 TMIEQ8NEW7 156 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 MIPOL1Q8TD10 442 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 RPRD1AQ96P16 312 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 TPSD1Q9BZJ3 242 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 MAGEH1Q9H213 219 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 MTG2Q9H4K7 406 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 TMEM165Q9HC07 324 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 GDF3Q9NR23 364 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 TMEM74BQ9NUR3 256 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 UVRAGQ9P2Y5 699 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 LHX3Q9UBR4 397 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SERGEFQ9UGK8 458 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SUN2Q9UH99 717 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 FAM153AQ9UHL3 310 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 SNX12Q9UMY4 172 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 WASF2Q9Y6W5 498 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 MYO18AQ92614 2054 aaKnown RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 ADAMTS9Q9P2N4 1935 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 A0A0A6YYK5 440 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 FAM170AA1A519 330 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 H0Y626 953 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 K7ERQ8 282 aa3.97□□□□□ -1.77
LINC00648-202ENST00000555985 CDX4O14627 284 aaPredicted RBP3.97□□□□□ -1.77
LINC00648-202ENST00000555985 PJA2O43164 708 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms