RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	PAGE4	O60829	102 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	ATP2C2	O75185	946 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	TF	P02787	698 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	IRF1	P10914	325 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	SRD5A1	P18405	259 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	PTGER1	P34995	402 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	CLNS1A	P54105	237 aa	Known RBP	4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	HDAC4	P56524	1084 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	CEBPZ	Q03701	1054 aa	Known RBP	4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	GRIK3	Q13003	919 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	CAPS	Q13938	189 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	TOMM20	Q15388	145 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	CCNG2	Q16589	344 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	SMN1	Q16637	294 aa	Known RBP	4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	ZKSCAN2	Q63HK3	967 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	CES5A	Q6NT32	575 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	FRMD1	Q8N878	549 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	MCPH1	Q8NEM0	835 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	TMEM174	Q8WUU8	243 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	PSPC1	Q8WXF1	523 aa	Known RBP	4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	GTF3C6	Q969F1	213 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	COQ8B	Q96D53	544 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	RNF183	Q96D59	192 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	POLR1B	Q9H9Y6	1135 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	NRIP3	Q9NQ35	241 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	HAUS2	Q9NVX0	235 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	ZNF70	Q9UC06	446 aa	Predicted RBP	4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	TBC1D29	Q9UFV1	150 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	CARD8	Q9Y2G2	431 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	SLC45A1	Q9Y2W3	748 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	FAM96B	Q9Y3D0	163 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	ADAM18	Q9Y3Q7	739 aa		4.89	□□□□□ -1.63
KTN1-223	ENST00000555573	TYW5	A2RUC4	315 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	LIPT2	A6NK58	231 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	TM4SF1	P30408	202 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	HOXD13	P35453	343 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	HADHA	P40939	763 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	PPP3CC	P48454	512 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	FRG1	Q14331	258 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	TRIP6	Q15654	476 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	MTX3	Q5HYI7	312 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	NUGGC	Q68CJ6	796 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	NCEH1	Q6PIU2	408 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	CPLX2	Q6PUV4	134 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	CCDC129	Q6ZRS4	1044 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	NOXA1	Q86UR1	476 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	DNAJC10	Q8IXB1	793 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	NME8	Q8N427	588 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	TTC39C	Q8N584	583 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	GJC3	Q8NFK1	279 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	SMARCE1	Q969G3	411 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	ZNF333	Q96JL9	665 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	CRAMP1	Q96RY5	1269 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	WDR77	Q9BQA1	342 aa	Predicted RBP	4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	STRA6	Q9BX79	667 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	PLEKHA4	Q9H4M7	779 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	KLHL31	Q9H511	634 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	SLC6A13	Q9NSD5	602 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	HCFC1R1	Q9NWW0	138 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	HEY2	Q9UBP5	337 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	NDRG3	Q9UGV2	375 aa		4.88	□□□□□ -1.63
KTN1-223	ENST00000555573	TTC36	A6NLP5	189 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	EIF3CL	B5ME19	914 aa	Known RBP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573		K7ENM7	598 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	GTPBP1	O00178	669 aa	Known RBP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	MDM4	O15151	490 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	EIF2S1	P05198	315 aa	Known RBP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	PCNA	P12004	261 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	RARG	P13631	454 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	ITGAX	P20702	1163 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	CD38	P28907	300 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	DCTD	P32321	178 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	AVPR1A	P37288	418 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	PIP4K2A	P48426	406 aa	Predicted RBP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	NANOS3	P60323	173 aa	Known RBP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	SSBP2	P81877	361 aa	Predicted RBP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	FGFBP1	Q14512	234 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	EZH2	Q15910	746 aa	Known RBP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	COL28A1	Q2UY09	1125 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	DPCR1	Q3MIW9	517 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	EPHA10	Q5JZY3	1008 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	SHC4	Q6S5L8	630 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	TSSK4	Q6SA08	328 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	PIP4P1	Q86T03	277 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	WDTC1	Q8N5D0	677 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	FAM149B1	Q96BN6	582 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	ZFYVE19	Q96K21	471 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	SIN3A	Q96ST3	1273 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	MAP7D2	Q96T17	732 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	MXRA8	Q9BRK3	442 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	NPFFR1	Q9GZQ6	430 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	TKTL2	Q9H0I9	626 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	CDT1	Q9H211	546 aa		4.87	□□□□□ -1.63
KTN1-223	ENST00000555573	EHD2	Q9NZN4	543 aa		4.87	□□□□□ -1.63

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