RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 C1orf228Q6PIY5 440 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 UNQ6126/PRO20091Q6UXV3 157 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 MYLK4Q86YV6 388 aaPredicted RBP3.68□□□□□ -1.82
SNX6-204ENST00000555541 ZNF441Q8N8Z8 693 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 MCPH1Q8NEM0 835 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 POF1BQ8WVV4 589 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 ZNF385AQ96PM9 386 aaKnown RBP3.68□□□□□ -1.82
SNX6-204ENST00000555541 EGLN1Q9GZT9 426 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 TMEM51Q9NW97 253 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 NLKQ9UBE8 527 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 GRHPRQ9UBQ7 328 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 TP53BP1Q12888 1972 aaPredicted RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 A0A096LPK6 155 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 FAM157AC9JC47 383 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 F5H423 210 aaPredicted RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 IPO5O00410 1097 aaKnown RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 VNN2O95498 520 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 CH25HO95992 272 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 APOHP02749 345 aaPredicted RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 VEGFAP15692 232 aaPredicted RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 TIMP3P35625 211 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 PEX5P50542 639 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 RBM5P52756 815 aaKnown RBP eCLIP3.67□□□□□ -1.82
SNX6-204ENST00000555541 FAM27E3Q08E93 113 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 ST3GAL1Q11201 340 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 TROAPQ12815 778 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 LPIN1Q14693 890 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 RPE65Q16518 533 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 ZNF484Q5JVG2 852 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 JMJD6Q6NYC1 403 aaPredicted RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 CCDC129Q6ZRS4 1044 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 GALNT15Q8N3T1 639 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 SETD9Q8NE22 299 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 CTCFLQ8NI51 663 aaPredicted RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 CSGALNACT1Q8TDX6 532 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 NCSTNQ92542 709 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 GOLGA1Q92805 767 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 ATOH1Q92858 354 aaPredicted RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 SLC39A13Q96H72 371 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 TWSG1Q9GZX9 223 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 WDR6Q9NNW5 1121 aaKnown RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 HDAC6Q9UBN7 1215 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 CLDN16Q9Y5I7 305 aa3.67□□□□□ -1.82
SNX6-204ENST00000555541 COL2A1P02458 1487 aaPredicted RBP3.67□□□□□ -1.82
SNX6-204ENST00000555541 P2RY10O00398 339 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 FAM155BO75949 473 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 RPL3P39023 403 aaKnown RBP3.66□□□□□ -1.82
SNX6-204ENST00000555541 PTPN9P43378 593 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 TIGD6Q17RP2 521 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 GJB7Q6PEY0 223 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 SATL1Q86VE3 508 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 SPICE1Q8N0Z3 855 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 KBTBD3Q8NAB2 608 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 LINS1Q8NG48 757 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 USP13Q92995 863 aaPredicted RBP3.66□□□□□ -1.82
SNX6-204ENST00000555541 SDCCAG3Q96C92 435 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 EPYCQ99645 322 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 SAYSD1Q9NPB0 183 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 SCRT2Q9NQ03 307 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 TLR8Q9NR97 1041 aaKnown RBP3.66□□□□□ -1.82
SNX6-204ENST00000555541 ATP8A2Q9NTI2 1148 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 ZNF711Q9Y462 761 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 DAAM1Q9Y4D1 1078 aa3.66□□□□□ -1.82
SNX6-204ENST00000555541 ZNF587BE7ETH6 402 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 HBP1O60381 514 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 CLDN14O95500 239 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 IL1AP01583 271 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 FGF5P12034 268 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 TNNT1P13805 278 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 SLC18A2Q05940 514 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 ZBTB17Q13105 803 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 CUL4BQ13620 913 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 UBE4AQ14139 1066 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 ME3Q16798 604 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 PLEKHA7Q6IQ23 1121 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 TBC1D22AQ8WUA7 517 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 SECTM1Q8WVN6 248 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 THAP4Q8WY91 577 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 TRIB2Q92519 343 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 LTV1Q96GA3 475 aaPredicted RBP3.65□□□□□ -1.83
SNX6-204ENST00000555541 CTDSP1Q9GZU7 261 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 ZFP57Q9NU63 452 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 SMARCAL1Q9NZC9 954 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 CD207Q9UJ71 328 aa3.65□□□□□ -1.83
SNX6-204ENST00000555541 A0A1B0GU03 582 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 FAM172BPA6NC97 362 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 HNRNPCL2B2RXH8 293 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 GAGE7O76087 117 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 KDM4BO94953 1096 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 SERPINC1P01008 464 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 CRYAAP02489 173 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 LINC00271P0C7V0 271 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 GAGE12FP0CL80 117 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 GAGE12GP0CL81 117 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 GAGE12IP0CL82 117 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 CTPS1P17812 591 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 ADD2P35612 726 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 CENPAP49450 140 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 ZNF155Q12901 538 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms