RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CREB3L4Q8TEY5 395 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 INTS12Q96CB8 462 aaKnown RBP5.65□□□□□ -1.5
VRK1-205ENST00000555402 RSRC1Q96IZ7 334 aaKnown RBP5.65□□□□□ -1.5
VRK1-205ENST00000555402 VCPIP1Q96JH7 1222 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 NUF2Q9BZD4 464 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 MUC13Q9H3R2 512 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 ADD3Q9UEY8 706 aaKnown RBP5.65□□□□□ -1.5
VRK1-205ENST00000555402 NRBP1Q9UHY1 535 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 LAMP3Q9UQV4 416 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 WDR17Q8IZU2 1322 aa5.65□□□□□ -1.51
VRK1-205ENST00000555402 FAM237BA0A1B0GVD1 139 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 SEC31AO94979 1220 aaKnown RBP5.64□□□□□ -1.51
VRK1-205ENST00000555402 YWHAQP27348 245 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 HOXD13P35453 343 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 PBX3P40426 434 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 DPP6P42658 865 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 CLCNKBP51801 687 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 OLR1P78380 273 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 RUNX2Q13950 521 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 TWIST1Q15672 202 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 SYTL3Q4VX76 610 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 CFAP58Q5T655 872 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 C16orf54Q6UWD8 224 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 FAM57BQ71RH2 274 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 GSTA5Q7RTV2 222 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 LURAP1LQ8IV03 231 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 CCDC105Q8IYK2 499 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 CMASQ8NFW8 434 aaPredicted RBP5.64□□□□□ -1.51
VRK1-205ENST00000555402 RASSF8Q8NHQ8 419 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 PIGOQ8TEQ8 1089 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 SCFD2Q8WU76 684 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 HDAC7Q8WUI4 952 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 ATOH1Q92858 354 aaPredicted RBP5.64□□□□□ -1.51
VRK1-205ENST00000555402 PERPQ96FX8 193 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 FAM118BQ9BPY3 351 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 PIMREGQ9BSJ6 248 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 H2AFJQ9BTM1 129 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 AAMDCQ9H7C9 122 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 CLIC5Q9NZA1 410 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 KLHL13Q9P2N7 655 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 POLG2Q9UHN1 485 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 ZNF215Q9UL58 517 aaPredicted RBP5.64□□□□□ -1.51
VRK1-205ENST00000555402 MKLN1Q9UL63 735 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 A4GNTQ9UNA3 340 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 CACNA1IQ9P0X4 2223 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 MST1RQ04912 1400 aa5.64□□□□□ -1.51
VRK1-205ENST00000555402 FAM90A10PA6NDY2 464 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 DDTLA6NHG4 134 aaPredicted RBP5.63□□□□□ -1.51
VRK1-205ENST00000555402 FOXO6A8MYZ6 492 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 FAM157AC9JC47 383 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 AHCYL1O43865 530 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 MLYCDO95822 493 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 ZNF8P17098 575 aaPredicted RBP5.63□□□□□ -1.51
VRK1-205ENST00000555402 THBS3P49746 956 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 GHRHRQ02643 423 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 FRG1Q14331 258 aaKnown RBP5.63□□□□□ -1.51
VRK1-205ENST00000555402 WTAPQ15007 396 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 DPCR1Q3MIW9 517 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 TTC39AQ5SRH9 613 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 ISM2Q6H9L7 571 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 TTI2Q6NXR4 508 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 CPLX2Q6PUV4 134 aaKnown RBP5.63□□□□□ -1.51
VRK1-205ENST00000555402 RPAP2Q8IXW5 612 aaPredicted RBP5.63□□□□□ -1.51
VRK1-205ENST00000555402 KIAA2013Q8IYS2 634 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 TMEM116Q8NCL8 245 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 ARHGEF2Q92974 986 aaKnown RBP5.63□□□□□ -1.51
VRK1-205ENST00000555402 FAM149B1Q96BN6 582 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 CLMNQ96JQ2 1002 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.63□□□□□ -1.51
VRK1-205ENST00000555402 RAP2CQ9Y3L5 183 aa5.63□□□□□ -1.51
VRK1-205ENST00000555402 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 TYW5A2RUC4 315 aaKnown RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 LIPT2A6NK58 231 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 MYO1GB0I1T2 1018 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 TCERG1O14776 1098 aaKnown RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 VILLO15195 856 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 RNMTO43148 476 aaKnown RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 TSPAN9O75954 239 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 WNT1P04628 370 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 EIF2S1P05198 315 aaKnown RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 RARGP13631 454 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 SCP2P22307 547 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 TTKP33981 857 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 RFC1P35251 1148 aaPredicted RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 ACTN2P35609 894 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 SLC16A2P36021 539 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 HADHAP40939 763 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 EFNA5P52803 228 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 MC1RQ01726 317 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 HIST2H2ACQ16777 129 aaPredicted RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 MFSD4BQ5TF39 518 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 MEX3CQ5U5Q3 659 aaKnown RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 TBC1D9BQ66K14 1250 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 DDIASQ8IXT1 998 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 FAM185AQ8N0U4 392 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 C16orf52Q8NHV5 167 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 POMGNT1Q8WZA1 660 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 GTF3C6Q969F1 213 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 BBS4Q96RK4 519 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 SMARCAD1Q9H4L7 1026 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms