RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 COMTP21964 271 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 MAN1A1P33908 653 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SCNN1BP51168 640 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 IL9RQ01113 521 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SLC10A2Q12908 348 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 LBRQ14739 615 aaKnown RBP12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 STAT4Q14765 748 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PDK2Q15119 407 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TCEAL1Q15170 157 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TMEM259Q4ZIN3 620 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SETMARQ53H47 684 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NCBP2-AS2Q69YL0 99 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NAPEPLDQ6IQ20 393 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RAD9BQ6WBX8 426 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ZSWIM9Q86XI8 627 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SPATS2Q86XZ4 545 aaKnown RBP12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CCDC170Q8IYT3 715 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PGBD5Q8N414 524 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CINPQ9BW66 212 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 OSBPL1AQ9BXW6 950 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 GOLPH3Q9H4A6 298 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TM7SF3Q9NS93 570 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 EPN1Q9Y6I3 576 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 DUSP10Q9Y6W6 482 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 DOCK9Q9BZ29 2069 aa12.56□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SPAARA0A1B0GVQ0 90 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 UPK3BL1B0FP48 263 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 UPK3BL2E5RIL1 263 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PRAMEF26H0Y7S4 382 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NEMP1O14524 444 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 AREL1O15033 823 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 AP1G1O43747 822 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 MFSD11O43934 449 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CER1O95813 267 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CEACAM1P13688 526 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CSNK1DP48730 415 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RPS21P63220 83 aaKnown RBP12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NSUN2Q08J23 767 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SLC14A1Q13336 389 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RFTN1Q14699 578 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PAFAH1B3Q15102 231 aaKnown RBP12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SHBQ15464 509 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SPA17Q15506 151 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ZNF423Q2M1K9 1284 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TMCO4Q5TGY1 634 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 KDM7AQ6ZMT4 941 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 DBX2Q6ZNG2 339 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TMTC1Q8IUR5 882 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 MAP7D3Q8IWC1 876 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 MFSD2AQ8NA29 543 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SETD7Q8WTS6 366 aaKnown RBP12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 FAF2Q96CS3 445 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 BMFQ96LC9 184 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RNF157Q96PX1 679 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 C1QTNF2Q9BXJ5 285 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RCOR3Q9P2K3 495 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 DKK3Q9UBP4 350 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 LCMT1Q9UIC8 334 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TPX2Q9ULW0 747 aaKnown RBP12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 DMTF1Q9Y222 760 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 REXO2Q9Y3B8 237 aaKnown RBP12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ALG6Q9Y672 507 aa12.55□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CACNA1AO00555 2505 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TSPAN6O43657 245 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NDUFA10O95299 355 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 FECHP22830 423 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CYLC1P35663 651 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NXPH1P58417 271 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 MAXP61244 160 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 GBE1Q04446 702 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 BNIP3Q12983 259 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SGCGQ13326 291 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 LLGL1Q15334 1064 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 UGP2Q16851 508 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 GATAD2AQ86YP4 633 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ATPAF2Q8N5M1 289 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TMEM145Q8NBT3 493 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RAB7BQ96AH8 199 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SKA1Q96BD8 255 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 KLHDC7BQ96G42 594 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ZNF641Q96N77 438 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ZNF599Q96NL3 588 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PSKH2Q96QS6 385 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ZNF670Q9BS34 389 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 WRAP53Q9BUR4 548 aaKnown RBP12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SLC32A1Q9H598 525 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PCDH12Q9NPG4 1184 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 BTBD3Q9Y2F9 522 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PCDHGC4Q9Y5F7 938 aa12.54□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PCNX2A6NKB5 2137 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 A0A1B0GTQ1 180 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 POM121BA6NF01 834 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 GOLGA8CPA6NN73 597 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 A8MX80 341 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms