RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SPON2Q9BUD6 331 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 TUBB2BQ9BVA1 445 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 TM6SF2Q9BZW4 377 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ATP13A1Q9HD20 1204 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 KLF15Q9UIH9 416 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 GGT7Q9UJ14 662 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ITM2BQ9Y287 266 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 PCDHB1Q9Y5F3 818 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 FADS3Q9Y5Q0 445 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 HELZ2Q9BYK8 2649 aaKnown RBP10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ATMQ13315 3056 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 A0A0A6YYK5 440 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-215ENST00000554656 DDX3XO00571 662 aaKnown RBP eCLIP10.75□□□□□ -0.691e-14■■□□□ 13.5
SHMT2-215ENST00000554656 NEBLO76041 1014 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 L1CAMP32004 1257 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 NEK3P51956 506 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 GNG11P61952 73 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 FMO1Q01740 532 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 CDR2Q01850 454 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 FZD2Q14332 565 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 IFI16Q16666 785 aaKnown RBP10.75□□□□□ -0.69
SHMT2-215ENST00000554656 CDCP2Q5VXM1 449 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 KYAT3Q6YP21 454 aaKnown RBP10.75□□□□□ -0.69
SHMT2-215ENST00000554656 TRIM72Q6ZMU5 477 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 Q6ZSR6 202 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 ARCQ7LC44 396 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 PTAR1Q7Z6K3 402 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-215ENST00000554656 CACTIN-AS1Q8N1I8 211 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 TRIM58Q8NG06 486 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 OR6K2Q8NGY2 324 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 KLF6Q99612 283 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-215ENST00000554656 HEPHQ9BQS7 1158 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.75□□□□□ -0.69
SHMT2-215ENST00000554656 ZYG11BQ9C0D3 744 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 CEP44Q9C0F1 390 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 PDCL3Q9H2J4 239 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 PRORYQ9H606 182 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 ZDHHC6Q9H6R6 413 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 LZTFL1Q9NQ48 299 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 DYRK4Q9NR20 520 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 PPARGC1AQ9UBK2 798 aaKnown RBP10.75□□□□□ -0.69
SHMT2-215ENST00000554656 CLCA2Q9UQC9 943 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 AK5Q9Y6K8 562 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 ANKRD36A6QL64 1941 aa10.75□□□□□ -0.69
SHMT2-215ENST00000554656 C2CD4BA6NLJ0 364 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 A6NNZ2 444 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 K7ESM1 405 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 AP1G1O43747 822 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 OPA1O60313 960 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 C1QL1O75973 258 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 PAK4O96013 591 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 MT-CO3P00414 261 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 PRB1P04280 392 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 CYP1A1P04798 512 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 H2AFZP0C0S5 128 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 CKMT1AP12532 417 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 MMP8P22894 467 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 ADRA1BP35368 520 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 RECQLP46063 649 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 DNA2P51530 1060 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 DAB2P98082 770 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 NRG1Q02297 640 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 C1QBPQ07021 282 aaKnown RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 PTP4A2Q12974 167 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 TCEAL1Q15170 157 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 CDO1Q16878 200 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 CCDC14Q49A88 953 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 CARD16Q5EG05 197 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 ACBD5Q5T8D3 534 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 KIAA1161Q6NSJ0 714 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 RETSATQ6NUM9 610 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 SYT10Q6XYQ8 523 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 LEKR1Q6ZMV7 388 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 H2AFVQ71UI9 128 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 CCDC185Q8N715 623 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 ZNF548Q8NEK5 533 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 RXFP2Q8WXD0 754 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 ARHGEF2Q92974 986 aaKnown RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 IFT43Q96FT9 208 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 PPP1R16AQ96I34 528 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 APOLD1Q96LR9 279 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 SLC17A9Q9BYT1 436 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 LACRTQ9GZZ8 138 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 ISCUQ9H1K1 167 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 NOL6Q9H6R4 1146 aaKnown RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 NLGN3Q9NZ94 848 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 PNMA8BQ9ULN7 279 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-215ENST00000554656 GUCA1BQ9UMX6 200 aa10.74□□□□□ -0.69
SHMT2-215ENST00000554656 SPTY2D1-AS1A0A0U1RR47 76 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 A0A1W2PNU3 283 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-215ENST00000554656 ANKRD62A6NC57 917 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 RCCD1A6NED2 376 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 IGLON5A6NGN9 336 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 SCAMP1O15126 338 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 CASC3O15234 703 aaKnown RBP10.73□□□□□ -0.69
SHMT2-215ENST00000554656 LRIG2O94898 1065 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 TMEM253P0C7T8 217 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 CASQ1P31415 396 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 HDAC4P56524 1084 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 RPS21P63220 83 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms