RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 EEF2KO00418 725 aaKnown RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 INSIG1O15503 277 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 PRAMEF11O60813 436 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 MMP20O60882 483 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 TM7SF2O76062 418 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 CKMT1AP12532 417 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 SKILP12757 684 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 NME1P15531 152 aaKnown RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 ERCC2P18074 760 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 MIPP30301 263 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 PAPOLAP51003 745 aaKnown RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 ZNF135P52742 658 aaPredicted RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 YPEL5P62699 121 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 TARDBPQ13148 414 aaKnown RBP eCLIP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 RTP5Q14D33 572 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 ACAP1Q15027 740 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 CA9Q16790 459 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 TMEM52BQ4KMG9 183 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 ZNF542PQ5EBM4 170 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 HES3Q5TGS1 186 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 AFMIDQ63HM1 303 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 E4F1Q66K89 784 aaPredicted RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 PTAR1Q7Z6K3 402 aaPredicted RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 DNAAF5Q86Y56 855 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 NETO2Q8NC67 525 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 ZNF641Q96N77 438 aaPredicted RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 PEBP4Q96S96 227 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 DUSP23Q9BVJ7 150 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 NRSN2Q9GZP1 204 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 SUV39H2Q9H5I1 410 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 DHX35Q9H5Z1 703 aaKnown RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 CAAP1Q9H8G2 361 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 PDFQ9HBH1 243 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 GPATCH2LQ9NWQ4 482 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 DNAJC28Q9NX36 388 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 CNOT8Q9UFF9 292 aaKnown RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 PCSK1NQ9UHG2 260 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 GGT7Q9UJ14 662 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 RALYQ9UKM9 306 aaKnown RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 FASNP49327 2511 aaKnown RBP11.25□□□□□ -0.61
ABCD4-221ENST00000554453 LRRK1Q38SD2 2015 aa11.25□□□□□ -0.61
ABCD4-221ENST00000554453 KIF26BQ2KJY2 2108 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 K7ESM1 405 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 TPP1O14773 563 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 DAPK3O43293 454 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 PRPSAP2O60256 369 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 BUB1BO60566 1050 aaPredicted RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 SERPINC1P01008 464 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 MYBL1P10243 752 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 ALPPL2P10696 532 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 ITIH2P19823 946 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 PCK1P35558 622 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 DUSP3P51452 185 aaPredicted RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 CLDN6P56747 220 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 DAB2P98082 770 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 INSM1Q01101 510 aaPredicted RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 NSUN2Q08J23 767 aaKnown RBP eCLIP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 ELP6Q0PNE2 266 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 EIF2B5Q13144 721 aaKnown RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 PDE1CQ14123 709 aaPredicted RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 PTK2BQ14289 1009 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 UGP2Q16851 508 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 BOLA3Q53S33 107 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 RFX8Q6ZV50 586 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 CYP4V2Q6ZWL3 525 aaPredicted RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 PARGQ86W56 976 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 BTN2A2Q8WVV5 523 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 SYN2Q92777 582 aaPredicted RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 TRIM11Q96F44 468 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 APOLD1Q96LR9 279 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 TUBGCP5Q96RT8 1024 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 KCTD15Q96SI1 283 aaPredicted RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 SNRNP25Q9BV90 132 aaKnown RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 C1QTNF7Q9BXJ2 289 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 TRIM7Q9C029 511 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 USP29Q9HBJ7 922 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 MRPL47Q9HD33 250 aaKnown RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 KLF15Q9UIH9 416 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 SALL4Q9UJQ4 1053 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 LHX6Q9UPM6 363 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 ITM2BQ9Y287 266 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 RAXQ9Y2V3 346 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 BZW2Q9Y6E2 419 aaKnown RBP11.24□□□□□ -0.61
ABCD4-221ENST00000554453 SPEGQ15772 3267 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 SHROOM3Q8TF72 1996 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 ATRXP46100 2492 aa11.24□□□□□ -0.61
ABCD4-221ENST00000554453 ZZEF1O43149 2961 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 AHCTF1Q8WYP5 2266 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 LY6G6EA0A0G2JKS1 128 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 A0A1W2PQJ5 194 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 TSPAN11A1L157 253 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 TMEM110-MUSTN1A8MSY1 372 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 H3BM21 787 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
ABCD4-221ENST00000554453 FFAR2O15552 330 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 ATMINO43313 823 aaPredicted RBP11.23□□□□□ -0.61
ABCD4-221ENST00000554453 LRCH4O75427 683 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 PALMO75781 387 aa11.23□□□□□ -0.61
ABCD4-221ENST00000554453 MT-CO3P00414 261 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms