RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 HMCESQ96FZ2 354 aa22.14■■□□□ 1.13
RCCD1-202ENST00000554302 MCEEQ96PE7 176 aa22.14■■□□□ 1.13
RCCD1-202ENST00000554302 CPEB1Q9BZB8 566 aaKnown RBP22.14■■□□□ 1.13
RCCD1-202ENST00000554302 SALL4Q9UJQ4 1053 aa22.14■■□□□ 1.13
RCCD1-202ENST00000554302 PCDHB1Q9Y5F3 818 aa22.14■■□□□ 1.13
RCCD1-202ENST00000554302 TPP1O14773 563 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 AQP9O43315 295 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 IGSF6O95976 241 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 TIMP2P16035 220 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 JUNDP17535 347 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 IGFALSP35858 605 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 YPEL5P62699 121 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 RAD51Q06609 339 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 STX1AQ16623 288 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 TBC1D25Q3MII6 688 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 ACAD10Q6JQN1 1059 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 SCYL2Q6P3W7 929 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 MCOLN2Q8IZK6 566 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 EPAS1Q99814 870 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 PRORYQ9H606 182 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 CATSPERBQ9H7T0 1116 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 LHX3Q9UBR4 397 aa22.13■■□□□ 1.13
RCCD1-202ENST00000554302 IPO11Q9UI26 975 aaKnown RBP22.13■■□□□ 1.13
RCCD1-202ENST00000554302 PNMA8BQ9ULN7 279 aaPredicted RBP22.13■■□□□ 1.13
RCCD1-202ENST00000554302 COL27A1Q8IZC6 1860 aaPredicted RBP22.13■■□□□ 1.13
RCCD1-202ENST00000554302 ANKRD62A6NC57 917 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 TOR1BO14657 336 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 RRP8O43159 456 aaKnown RBP22.12■■□□□ 1.13
RCCD1-202ENST00000554302 CREB3O43889 395 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 FERP16591 822 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 HTR7P34969 479 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 ACTN2P35609 894 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 RHOAP61586 193 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 OGDHQ02218 1023 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 PTK2BQ14289 1009 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 CYTH1Q15438 398 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 LRRC73Q5JTD7 316 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 LRRC69Q6ZNQ3 347 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 IRF2BP2Q7Z5L9 587 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 TP53I13Q8NBR0 393 aaPredicted RBP22.12■■□□□ 1.13
RCCD1-202ENST00000554302 NETO2Q8NC67 525 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 IFI44Q8TCB0 444 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 HCAR2Q8TDS4 363 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 BTN2A2Q8WVV5 523 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 TBATAQ96M53 351 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 LRRC19Q9H756 370 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 PDFQ9HBH1 243 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 SEPT11Q9NVA2 429 aaKnown RBP22.12■■□□□ 1.13
RCCD1-202ENST00000554302 EVA1BQ9NVM1 165 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 NCKIPSDQ9NZQ3 722 aa22.12■■□□□ 1.13
RCCD1-202ENST00000554302 FGF10O15520 208 aaPredicted RBP22.11■■□□□ 1.13
RCCD1-202ENST00000554302 KALRNO60229 2985 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 MMP20O60882 483 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 TM7SF2O76062 418 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 ITIH2P19823 946 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 CDK11BP21127 795 aaKnown RBP22.11■■□□□ 1.13
RCCD1-202ENST00000554302 SUOXP51687 545 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 TMEM52BQ4KMG9 183 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 ZNF354CQ86Y25 554 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 VCPIP1Q96JH7 1222 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 DEPDC7Q96QD5 511 aa22.11■■□□□ 1.13
RCCD1-202ENST00000554302 MBNL1Q9NR56 388 aaKnown RBP22.11■■□□□ 1.13
RCCD1-202ENST00000554302 TSPAN11A1L157 253 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 EME2A4GXA9 379 aaPredicted RBP22.1■■□□□ 1.13
RCCD1-202ENST00000554302 INSIG1O15503 277 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 DXOO77932 396 aaKnown RBP22.1■■□□□ 1.13
RCCD1-202ENST00000554302 CCDC172P0C7W6 258 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 VPS36Q86VN1 386 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 RBFAQ8N0V3 343 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 LMX1AQ8TE12 382 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 CXorf40AQ8TE69 158 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 GBP4Q96PP9 640 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 BOCQ9BWV1 1114 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 C1QTNF7Q9BXJ2 289 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 TCEAL2Q9H3H9 227 aaPredicted RBP22.1■■□□□ 1.13
RCCD1-202ENST00000554302 TAS2R14Q9NYV8 317 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 SPASTQ9UBP0 616 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 MYO6Q9UM54 1294 aa22.1■■□□□ 1.13
RCCD1-202ENST00000554302 CSO75390 466 aaKnown RBP22.09■■□□□ 1.13
RCCD1-202ENST00000554302 GCATO75600 419 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 ATP1A3P13637 1013 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 NDST2P52849 883 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 THOP1P52888 689 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 MAMLD1Q13495 774 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 KLHL40Q2TBA0 621 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 DEFB133Q30KQ1 61 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 GUSBP11Q6P575 273 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 DCUN1D2Q6PH85 259 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 MACC1Q6ZN28 852 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 DNAAF5Q86Y56 855 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 MAPK15Q8TD08 544 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 HIC2Q96JB3 615 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 ZNF578Q96N58 590 aaPredicted RBP22.09■■□□□ 1.13
RCCD1-202ENST00000554302 DONSONQ9NYP3 566 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 UBA2Q9UBT2 640 aaPredicted RBP22.09■■□□□ 1.13
RCCD1-202ENST00000554302 APOBEC3BQ9UH17 382 aaKnown RBP22.09■■□□□ 1.13
RCCD1-202ENST00000554302 RAI2Q9Y5P3 530 aa22.09■■□□□ 1.13
RCCD1-202ENST00000554302 PTPRQQ9UMZ3 2332 aa22.08■■□□□ 1.13
RCCD1-202ENST00000554302 LMO7DNF2Z398 122 aa22.08■■□□□ 1.13
RCCD1-202ENST00000554302 TGM2P21980 687 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms