RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CENPTQ96BT3 561 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 GRAMD1AQ96CP6 724 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 PCMTD1Q96MG8 357 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 MYOCQ99972 504 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 C1QTNF7Q9BXJ2 289 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 MAGEB5Q9BZ81 275 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 FZD3Q9NPG1 666 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 UCKL1Q9NWZ5 548 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 SALL4Q9UJQ4 1053 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 CLCA2Q9UQC9 943 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 ACTL7AQ9Y615 435 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 COL6A6A6NMZ7 2263 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 CELSR3Q9NYQ7 3312 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 LY6G6EA0A0G2JKS1 128 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 FAM170AA1A519 330 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 RASA4BC9J798 803 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 K7ESM1 405 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 NEMP1O14524 444 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 RAD51BO15315 384 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 FFAR2O15552 330 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 RASA4O43374 803 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 TM7SF2O76062 418 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 DXOO77932 396 aaKnown RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 MT-CO3P00414 261 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 GZMAP12544 262 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 ATP1A3P13637 1013 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 EIF2S3P41091 472 aaKnown RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 ABCG1P45844 678 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 CSNK1DP48730 415 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 PEX5P50542 639 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 RHOAP61586 193 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 ELP6Q0PNE2 266 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 PDE1CQ14123 709 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 AGERQ15109 404 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 TMEM52BQ4KMG9 183 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 ATXN7L2Q5T6C5 722 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 PLEKHA7Q6IQ23 1121 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 SCYL2Q6P3W7 929 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 DCUN1D2Q6PH85 259 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 C19orf48Q6RUI8 117 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 TMC6Q7Z403 805 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 PHLDB2Q86SQ0 1253 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 TTC7BQ86TV6 843 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 DNAAF5Q86Y56 855 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 PSTKQ8IV42 348 aaKnown RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 PYROXD2Q8N2H3 581 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 SDR16C5Q8N3Y7 309 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF548Q8NEK5 533 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 OR6K2Q8NGY2 324 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 HMCESQ96FZ2 354 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 APOLD1Q96LR9 279 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF641Q96N77 438 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 KLHL32Q96NJ5 620 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 MCEEQ96PE7 176 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 DEPDC7Q96QD5 511 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 TUBGCP5Q96RT8 1024 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 TSPY26PQ9H489 355 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 LRRC19Q9H756 370 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 PDFQ9HBH1 243 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 RTN4Q9NQC3 1192 aaKnown RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 SEPT11Q9NVA2 429 aaKnown RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 PARVAQ9NVD7 372 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 DNAJC28Q9NX36 388 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 LHX3Q9UBR4 397 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 UBA2Q9UBT2 640 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-203ENST00000554074 GGT7Q9UJ14 662 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 U3KQA8 63 aa6.69□□□□□ -1.34
SLIRP-203ENST00000554074 AHCTF1Q8WYP5 2266 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 A0A1W2PQC6 194 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 EME2A4GXA9 379 aaPredicted RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 CFAP69A5D8W1 941 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 ARHGAP42A6NI28 874 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TMEM110-MUSTN1A8MSY1 372 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 LMO7DNF2Z398 122 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 GOLGA6L19H0YKK7 550 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 RRP8O43159 456 aaKnown RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 AQP9O43315 295 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TLX3O43711 291 aaPredicted RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 CREB3O43889 395 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 OPA1O60313 960 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 PRAMEF11O60813 436 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TIMP2P16035 220 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 JUNDP17535 347 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TNFAIP3P21580 790 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 GKP32189 559 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 ACTN2P35609 894 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 IGFALSP35858 605 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 PRKCIP41743 596 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 HCAR3P49019 387 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 THOP1P52888 689 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 CLDN6P56747 220 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TPI1P60174 286 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 OGDHQ02218 1023 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 EIF2B5Q13144 721 aaKnown RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 MAMLD1Q13495 774 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 RFTN1Q14699 578 aaPredicted RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 ACAP1Q15027 740 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 IQCB1Q15051 598 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 CYTH1Q15438 398 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TBC1D25Q3MII6 688 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms