RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 C10orf88Q9H8K7 445 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 OBP2AQ9NY56 170 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 GRHL1Q9NZI5 618 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 IPO11Q9UI26 975 aaKnown RBP14.71□□□□□ -0.05
SHMT2-208ENST00000553868 TPX2Q9ULW0 747 aaKnown RBP14.71□□□□□ -0.05
SHMT2-208ENST00000553868 DENND4CQ5VZ89 1909 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 USP9XQ93008 2570 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-208ENST00000553868 ILVBLA1L0T0 632 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 GFRA2O00451 464 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 MATN3O15232 486 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 ZSCAN5DPP0CG00 497 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 VAV1P15498 845 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 IVDP26440 423 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 FDFT1P37268 417 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 ABCG1P45844 678 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 PAPOLAP51003 745 aaKnown RBP14.7□□□□□ -0.06
SHMT2-208ENST00000553868 IRAK1P51617 712 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 PLTPP55058 493 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 RPS24P62847 133 aaKnown RBP14.7□□□□□ -0.06
SHMT2-208ENST00000553868 GNA12Q03113 381 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 MORF4L2Q15014 288 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 ZNF77Q15935 545 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 FBXO38Q6PIJ6 1188 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 LPCAT2Q7L5N7 544 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 HOOK3Q86VS8 718 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 RASSF3Q86WH2 238 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 CIR1Q86X95 450 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-208ENST00000553868 ZNF354CQ86Y25 554 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 BBS7Q8IWZ6 715 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 PPIL6Q8IXY8 311 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 CCDC33Q8N5R6 958 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 DEFB119Q8N690 84 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 DDI1Q8WTU0 396 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 ACDQ96AP0 544 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 SP110Q9HB58 689 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 THG1LQ9NWX6 298 aaKnown RBP14.7□□□□□ -0.06
SHMT2-208ENST00000553868 SEPT10Q9P0V9 454 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 KLHL8Q9P2G9 620 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-208ENST00000553868 ZNF212Q9UDV6 495 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 PILRBQ9UKJ0 227 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 HPCAL4Q9UM19 191 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 SHOC2Q9UQ13 582 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 CCL26Q9Y258 94 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 TBC1D30Q9Y2I9 924 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 PCDHB9Q9Y5E1 797 aa14.7□□□□□ -0.06
SHMT2-208ENST00000553868 MAP3K13O43283 966 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 MAFKO60675 156 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 LUC7L3O95232 432 aaKnown RBP14.69□□□□□ -0.06
SHMT2-208ENST00000553868 HNRNPLP14866 589 aaKnown RBP eCLIP14.69□□□□□ -0.06
SHMT2-208ENST00000553868 ETS1P14921 441 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 RENBPP51606 427 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 CLCN6P51797 869 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 ITGA8P53708 1063 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 IFI35P80217 286 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-208ENST00000553868 BASP1P80723 227 aaKnown RBP14.69□□□□□ -0.06
SHMT2-208ENST00000553868 IL10RBQ08334 325 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 SERINC3Q13530 473 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 CDH18Q13634 790 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 ANKRD20A2Q5SQ80 823 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 ANKRD20A1Q5TYW2 823 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 ANKRD20A3Q5VUR7 823 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 PPP1R21Q6ZMI0 780 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 B4GALNT4Q76KP1 1039 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 GLIS1Q8NBF1 620 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 CCDC110Q8TBZ0 833 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 AENQ8WTP8 325 aaKnown RBP14.69□□□□□ -0.06
SHMT2-208ENST00000553868 CAVIN3Q969G5 261 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 MYEOVQ96EZ4 313 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 HMCESQ96FZ2 354 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 FRMD8Q9BZ67 464 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-208ENST00000553868 NOL6Q9H6R4 1146 aaKnown RBP14.69□□□□□ -0.06
SHMT2-208ENST00000553868 POLMQ9NP87 494 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-208ENST00000553868 RAB6BQ9NRW1 208 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 NDFIP2Q9NV92 336 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 DKK4Q9UBT3 224 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 SLC6A14Q9UN76 642 aa14.69□□□□□ -0.06
SHMT2-208ENST00000553868 GOLGA6CA6NDK9 693 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 GOLGA6BA6NDN3 693 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 TRABD2BA6NFA1 517 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 E7EVH7 732 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 KCNK1O00180 336 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 GOLGA6DP0CG33 693 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 CCNB1P14635 433 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 PTPN3P26045 913 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 GJA4P35212 333 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 TNNT3P45378 269 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-208ENST00000553868 SEC13P55735 322 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 WASHC5Q12768 1159 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 HNRNPDQ14103 355 aaKnown RBP14.68□□□□□ -0.06
SHMT2-208ENST00000553868 PRPSAP1Q14558 356 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 TRADDQ15628 312 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 PARP6Q2NL67 630 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 FBXO43Q4G163 708 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 TEX44Q53QW1 395 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 C2orf27AQ580R0 203 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 TMCO4Q5TGY1 634 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 LYSMD4Q5XG99 296 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 HIBCHQ6NVY1 386 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-208ENST00000553868 ZDHHC24Q6UX98 284 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 PID1Q7Z2X4 250 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms