RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 MAN2A2P49641 1150 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CDK10Q15131 360 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ZFP1Q6P2D0 407 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 STRA8Q7Z7C7 330 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SLC7A6OSQ96CW6 309 aaPredicted RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF512Q96ME7 567 aaPredicted RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SECISBP2Q96T21 854 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 TMEM117Q9H0C3 514 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 TMEM168Q9H0V1 697 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ABCB9Q9NP78 766 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 PCDHB4Q9Y5E5 795 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ZHX2Q9Y6X8 837 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 JCADQ9P266 1359 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 A0A1W2PPM1 405 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 C19orf81C9J6K1 198 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 TOR1AO14656 332 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 C4BPBP20851 252 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 TGM2P21980 687 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 PSMA4P25789 261 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 TYK2P29597 1187 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ADSSP30520 456 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 AVPR1AP37288 418 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 FCGRTP55899 365 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 GPC5P78333 572 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CYP4F8P98187 520 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 MGAT5Q09328 741 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 KDELC2Q7Z4H8 507 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 HCAR2Q8TDS4 363 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 RFFLQ8WZ73 363 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SEC14L1Q92503 715 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 RELTQ969Z4 430 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 GAD1Q99259 594 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CHST12Q9NRB3 414 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF98A6NK75 572 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 F8W036 122 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 H3BMQ9 156 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 NFKB1P19838 968 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 GCLMP48507 274 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 KCNK10P57789 538 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 RNASE12Q5GAN4 147 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ULK3Q6PHR2 472 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SFRP1Q8N474 314 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM71DQ8N9W8 422 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 OR5T3Q8NGG3 340 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 DTD1Q8TEA8 209 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF347Q96SE7 839 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ALG6Q9Y672 507 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ABCC2Q92887 1545 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 DENND3A2RUS2 1198 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 EFCAB10A6NFE3 127 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ST8SIA5O15466 376 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 BBOX1O75936 387 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 RAB3DO95716 219 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 PNPP00491 289 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 FDX1P10109 184 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 VPS72Q15906 364 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 PDK4Q16654 411 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM26DQ5JW98 314 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SHEQ5VZ18 495 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 OR5J2Q8NH18 312 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CPA5Q8WXQ8 436 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CPNE2Q96FN4 548 aaPredicted RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ZSCAN10Q96SZ4 725 aaPredicted RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SPATA9Q9BWV2 254 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF175Q9Y473 711 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 TMX2-CTNND1H3BSU7 103 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM20BO75063 409 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 XYLBO75191 536 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SRP72O76094 671 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 MTHFD1P11586 935 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 S100A2P29034 98 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 EIF4A1P60842 406 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CCDC157Q569K6 752 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CCNYL2Q5T2Q4 361 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 BICRALQ6AI39 1079 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 C16orf46Q6P387 395 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ARHGAP11AQ6P4F7 1023 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 PLET1Q6UQ28 207 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 KYQ8NBH2 561 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 NAA50Q9GZZ1 169 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 NINJ2Q9NZG7 142 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SUCOQ9UBS9 1254 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CC2D2AQ9P2K1 1620 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 RIMBP2O15034 1052 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 HNF1AP20823 631 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SSTR1P30872 391 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 RFC4P35249 363 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CAPGP40121 348 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 HSF2Q03933 536 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SELENBP1Q13228 472 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SGCAQ16586 387 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SMTNL2Q2TAL5 461 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 C3orf33Q6P1S2 294 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 SCARA5Q6ZMJ2 495 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 TRIM72Q6ZMU5 477 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 NOXA1Q86UR1 476 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 CARNMT1Q8N4J0 409 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 ANGPTL6Q8NI99 470 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 C10orf82Q8WW14 230 aa9.07□□□□□ -0.96
GTF2A1-203ENST00000553612 MYDGFQ969H8 173 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms