RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 HP1BP3Q5SSJ5 553 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 RNF219Q5W0B1 726 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 RAP1GAP2Q684P5 730 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 ALG1LQ6GMV1 187 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 ABI3BPQ7Z7G0 1075 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 CLEC14AQ86T13 490 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 CIR1Q86X95 450 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 LURAP1LQ8IV03 231 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 LGI2Q8N0V4 545 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 OR8D1Q8WZ84 308 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 ALG14Q96F25 216 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 NOX5Q96PH1 765 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 PRMT1Q99873 361 aaKnown RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 MYOCQ99972 504 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 DDX50Q9BQ39 737 aaKnown RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 USP29Q9HBJ7 922 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 FZD3Q9NPG1 666 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 PPM1HQ9ULR3 514 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 HPSEQ9Y251 543 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 CEP83Q9Y592 693 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 PCDHGA8Q9Y5G5 932 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 ENTPD2Q9Y5L3 495 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 C1QTNF3-AMACRE9PGA6 284 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 K7ESM1 405 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 M0QYV0 167 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 RNF103O00237 685 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 MCF2LO15068 1137 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 SCAMP1O15126 338 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 CASC3O15234 703 aaKnown RBP7.46□□□□□ -1.22
ATXN3-219ENST00000553488 NEBLO76041 1014 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 FBXO21O94952 628 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 CTSLP07711 333 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 PFKFB1P16118 471 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 PDGFRAP16234 1089 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 TACR2P21452 398 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 RPL13P26373 211 aaKnown RBP7.46□□□□□ -1.22
ATXN3-219ENST00000553488 SULT2A1Q06520 285 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 ADAM9Q13443 819 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 SLC12A1Q13621 1099 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF284Q2VY69 593 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 EDRF1Q3B7T1 1238 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 DSG4Q86SJ6 1040 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 HORMAD1Q86X24 394 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 CHSY1Q86X52 802 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 CCAR2Q8N163 923 aaKnown RBP7.46□□□□□ -1.22
ATXN3-219ENST00000553488 GUF1Q8N442 669 aaKnown RBP7.46□□□□□ -1.22
ATXN3-219ENST00000553488 EXD3Q8N9H8 876 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF548Q8NEK5 533 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-219ENST00000553488 OR52K2Q8NGK3 314 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 IFI44Q8TCB0 444 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 MAPK15Q8TD08 544 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 ATXN7L3BQ96GX2 97 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 HSFY1Q96LI6 401 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 SLC46A1Q96NT5 459 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 CALN1Q9BXU9 219 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 TRIM4Q9C037 500 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 UPF2Q9HAU5 1272 aaKnown RBP7.46□□□□□ -1.22
ATXN3-219ENST00000553488 ZFR2Q9UPR6 939 aaKnown RBP7.46□□□□□ -1.22
ATXN3-219ENST00000553488 MAPK8IP1Q9UQF2 711 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 NAALADL1Q9UQQ1 740 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 ACTL7BQ9Y614 415 aa7.46□□□□□ -1.22
ATXN3-219ENST00000553488 ARHGEF17Q96PE2 2063 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-219ENST00000553488 SDK2Q58EX2 2172 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 A0A1B0GVL5 298 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 TCAF2A6NFQ2 919 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 SLC31A1O15431 190 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 STX10O60499 249 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 MED26O95402 600 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 F13A1P00488 732 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 CALCAP01258 141 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 PAEPP09466 180 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 ALPPL2P10696 532 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 NME1P15531 152 aaKnown RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 HNRNPA2B1P22626 353 aaKnown RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 IRAK1P51617 712 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 CLDN2P57739 230 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 YWHAEP62258 255 aaKnown RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 PITX1P78337 314 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 FGL2Q14314 439 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 FZD2Q14332 565 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 DRAP1Q14919 205 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 ARL13BQ3SXY8 428 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 LINC00303Q3SY05 128 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 HS1BP3Q53T59 392 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 ZC3H12AQ5D1E8 599 aaKnown RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 TPRG1LQ5T0D9 272 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 FAM46CQ5VWP2 391 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 SYPL2Q5VXT5 272 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 ZCCHC8Q6NZY4 707 aaKnown RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 GUSBP11Q6P575 273 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 TMEM270Q6UE05 265 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 KYAT3Q6YP21 454 aaKnown RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 BEND5Q7L4P6 421 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 CCDC117Q8IWD4 279 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 SH2D3CQ8N5H7 860 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 STK35Q8TDR2 534 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 KLK6Q92876 244 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 ERCC4Q92889 916 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms