RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 HAS3O00219 553 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 CA12O43570 354 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 LMO2P25791 158 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 SNX16P57768 344 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 ADIGQ0VDE8 80 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 POU6F1Q14863 301 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 PSTKQ8IV42 348 aaKnown RBP12.48□□□□□ -0.41
HDAC7-230ENST00000552960 CHERPQ8IWX8 916 aaKnown RBP12.48□□□□□ -0.41
HDAC7-230ENST00000552960 CYGBQ8WWM9 190 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 PHF21BQ96EK2 531 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 KIAA1257Q9ULG3 409 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 SCN1AP35498 2009 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 HACD1B0YJ81 288 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 MPP1Q00013 466 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 CACNB2Q08289 660 aaPredicted RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 INCA1Q0VD86 236 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 FASTKQ14296 549 aaKnown RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ADRM1Q16186 407 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ANO4Q32M45 955 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 GDF6Q6KF10 455 aaPredicted RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ZYG11AQ6WRX3 759 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 NT5DC4Q86YG4 428 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 CELF6Q96J87 481 aaKnown RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 CNDP1Q96KN2 507 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ZFP42Q96MM3 310 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 OSBPL11Q9BXB4 747 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 FTHL17Q9BXU8 183 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ASB7Q9H672 318 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 OLAHQ9NV23 265 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 EGFL7Q9UHF1 273 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 MID2Q9UJV3 735 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ADAM28Q9UKQ2 775 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 PRORSD1PA6NEY8 169 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 FAM72CH0Y354 149 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 NRP1O14786 923 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 RECQL4O94761 1208 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 NFKB1P19838 968 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 CDK9P50750 372 aaKnown RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 FAM72AQ5TYM5 149 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 FAM72DQ6L9T8 149 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 PATL1Q86TB9 770 aaKnown RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 IFNEQ86WN2 208 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 FAM72BQ86X60 149 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 FNDC8Q8TC99 324 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 CANT1Q8WVQ1 401 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 YIPF2Q9BWQ6 316 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ACOT9Q9Y305 439 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 JCHAINP01591 159 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 PTPN3P26045 913 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 PTPN9P43378 593 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 NDUFV1P49821 464 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 CPT1AP50416 773 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 SOX4Q06945 474 aaPredicted RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 GEN1Q17RS7 908 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 GPR107Q5VW38 600 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 XKR5Q6UX68 686 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 CHST15Q7LFX5 561 aaPredicted RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 LSMEM2Q8N112 164 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 LZICQ8WZA0 190 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 EXT2Q93063 718 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ASB9Q96DX5 294 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 EFHD1Q9BUP0 239 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 TRIM8Q9BZR9 551 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 ATXN3LQ9H3M9 355 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 POMKQ9H5K3 350 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 CLK4Q9HAZ1 481 aaKnown RBP12.47□□□□□ -0.41
HDAC7-230ENST00000552960 PNPLA3Q9NST1 481 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 SNX10Q9Y5X0 201 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 V9GYQ6 96 aa12.47□□□□□ -0.41
HDAC7-230ENST00000552960 C17orf102A2RUQ5 167 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 RRN3P2A6NIE6 340 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 C9IYK1 514 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 H3BNH8 94 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 CLDN5O00501 218 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 SOCS2O14508 198 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 HTRA2O43464 458 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-230ENST00000552960 XPOTO43592 962 aaKnown RBP12.46□□□□□ -0.41
HDAC7-230ENST00000552960 CABYRO75952 493 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 CYBAP13498 195 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 ERCC2P18074 760 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 TM4SF4P48230 202 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 SLC7A2P52569 658 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 SLC12A2P55011 1212 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 ATP1A4Q13733 1029 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 CSHL1Q14406 222 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 SLC26A9Q7LBE3 791 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 OFCC1Q8IZS5 231 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 ELMO2Q96JJ3 720 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 FZD10Q9ULW2 581 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 SH3GLB1Q9Y371 365 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 PCDHGA7Q9Y5G6 932 aa12.46□□□□□ -0.41
HDAC7-230ENST00000552960 SMIM35A0A1B0GVV1 85 aa12.46□□□□□ -0.42
HDAC7-230ENST00000552960 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.42
HDAC7-230ENST00000552960 PSMD12O00232 456 aaPredicted RBP12.46□□□□□ -0.42
HDAC7-230ENST00000552960 MRASO14807 208 aa12.46□□□□□ -0.42
HDAC7-230ENST00000552960 UBDO15205 165 aa12.46□□□□□ -0.42
HDAC7-230ENST00000552960 SPTLC1O15269 473 aa12.46□□□□□ -0.42
HDAC7-230ENST00000552960 H2AFYO75367 372 aaKnown RBP12.46□□□□□ -0.42
HDAC7-230ENST00000552960 SBK3P0C264 359 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms