RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CR2P20023 1033 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 CD27P26842 260 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 SERPINA4P29622 427 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 NUDT1P36639 197 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 PEX5P50542 639 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 SUOXP51687 545 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 PPP2CBP62714 309 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 PPP2CAP67775 309 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 IFI35P80217 286 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 LMNB2Q03252 620 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 GSE1Q14687 1217 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 DUOXA1Q1HG43 343 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 KAZNQ674X7 775 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 NEK5Q6P3R8 708 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 FBXL19Q6PCT2 694 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 BRAT1Q6PJG6 821 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 BBS12Q6ZW61 710 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 BZW1Q7L1Q6 419 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 CCDC13Q8IYE1 715 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 PGBD5Q8N414 524 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 HCAR2Q8TDS4 363 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 BIRC7Q96CA5 298 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 HES6Q96HZ4 224 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 KLHL32Q96NJ5 620 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 ALS2CR12Q96Q35 445 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 NUDCD1Q96RS6 583 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 TMEM74BQ9NUR3 256 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 PPP2R2CQ9Y2T4 447 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 LRP4O75096 1905 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 KNL1Q8NG31 2342 aa11.85□□□□□ -0.51
TRAFD1-209ENST00000552896 ASCC3Q8N3C0 2202 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 A0A1B0GTW7 788 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 FAM47DPA6NHR8 397 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 PRR5-ARHGAP8B1AHC4 643 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 APOC4-APOC2K7ER74 178 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 SOCS5O75159 536 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 APOC2P02655 101 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 PTMAP06454 111 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 SERPINF2P08697 491 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 CCNB1P14635 433 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 PECAM1P16284 738 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 CETN2P41208 172 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 ABL2P42684 1182 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 PRKD1Q15139 912 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 CCDC6Q16204 474 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 TRIM61Q5EBN2 209 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 CFAP58Q5T655 872 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 KIAA1161Q6NSJ0 714 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 SLC23A3Q6PIS1 610 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 NPNTQ6UXI9 565 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 RGL4Q8IZJ4 473 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 ZCCHC9Q8N567 271 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 C12orf50Q8NA57 414 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 CCNYQ8ND76 341 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 C1orf216Q8TAB5 229 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 SPOCK2Q92563 424 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 P3H4Q92791 437 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 ECHDC3Q96DC8 303 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 LGMNQ99538 433 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 ORAI3Q9BRQ5 295 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 NUSAP1Q9BXS6 441 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 POLR1EQ9GZS1 481 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 KCNF1Q9H3M0 494 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 CAPN10Q9HC96 672 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 NT5MQ9NPB1 228 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 LZTFL1Q9NQ48 299 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 EIF2B4Q9UI10 523 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 PACSIN2Q9UNF0 486 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 FADS3Q9Y5Q0 445 aa11.84□□□□□ -0.51
TRAFD1-209ENST00000552896 ZNF106Q9H2Y7 1883 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3DA0A087WVF3 549 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3IA0A087WXS9 549 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3EA0A087X179 549 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3KA0A087X1G2 549 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 A0A1W2PPC4 97 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3FA6NER0 549 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 UPK3BL1B0FP48 263 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 PATE3B3GLJ2 98 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3LB9A6J9 549 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 UPK3BL2E5RIL1 263 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 AREL1O15033 823 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 KHNYNO15037 678 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 BCAT2O15382 392 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 SPINT1O43278 529 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TSPAN6O43657 245 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 RNGTTO60942 597 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 GJB3O75712 270 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 NEBLO76041 1014 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 CFIP05156 583 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3HP0C7X1 549 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 SCNN1BP51168 640 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 BCL2L1Q07817 233 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 ADCY2Q08462 1091 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 ELP6Q0PNE2 266 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 AP1B1Q10567 949 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 NOMO1Q15155 1222 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 SF3A2Q15428 464 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms