RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 ITGB2P05107 769 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 KRT10P13645 584 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 CTSEP14091 401 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 SLC5A2P31639 672 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 GKP32189 559 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 UGT1A5P35504 534 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 FLT3P36888 993 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 ACVRL1P37023 503 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 EIF4A3P38919 411 aaKnown RBP14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 MAPKAPK2P49137 400 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 MYLK3Q32MK0 819 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 TTC7BQ86TV6 843 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 FAM131BQ86XD5 332 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 XYLT1Q86Y38 959 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 SDR16C5Q8N3Y7 309 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 OR6C4Q8NGE1 309 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 CCDC74AQ96AQ1 378 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 SGF29Q96ES7 293 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 KLHL32Q96NJ5 620 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 CLPBQ9H078 707 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 SIRPGQ9P1W8 387 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 RWDD2AQ9UIY3 292 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 TMEM110-MUSTN1A8MSY1 372 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 D6RAR5 112 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 GOLGA8SH3BPF8 625 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 MMP20O60882 483 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 CD160O95971 181 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 RPLP0P05388 317 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 HTR1BP28222 390 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 CDH5P33151 784 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 PEX5P50542 639 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 INHBCP55103 352 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 RAD51Q06609 339 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 ARTNQ5T4W7 220 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 RWDD4Q6NW29 188 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 GDPD4Q6W3E5 623 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 B3GNT8Q7Z7M8 397 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 GKN2Q86XP6 184 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 HID1Q8IV36 788 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 FAM71AQ8IYT1 594 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 EXD3Q8N9H8 876 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 KYQ8NBH2 561 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 PCDH19Q8TAB3 1148 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 CFAP57Q96MR6 1250 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 TMEM74Q96NL1 305 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 EPAS1Q99814 870 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 MAGEH1Q9H213 219 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 SEPT10Q9P0V9 454 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 OR12D3Q9UGF7 316 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 IL17BQ9UHF5 180 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 ACSL6Q9UKU0 697 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 PNMA8BQ9ULN7 279 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 ACTL7AQ9Y615 435 aa14.37□□□□□ -0.11
CHMP1A-210ENST00000551981 BSNQ9UPA5 3926 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 ZSCAN5CA6NGD5 496 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 CYSRT1A8MQ03 144 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 CASC3O15234 703 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 EFSO43281 561 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 RAMP2O60895 175 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 RASGRP1O95267 797 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 LSM8O95777 96 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 JMJD7P0C870 316 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 PNMA6AP0CW24 399 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 LIPCP11150 499 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 SFTPCP11686 197 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 RHOQP17081 205 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 XPAP23025 273 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 CCKBRP32239 447 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 MTIF2P46199 727 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 SUOXP51687 545 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 HK3P52790 923 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 NRG1Q02297 640 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 LRRC73Q5JTD7 316 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 ARCQ7LC44 396 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 BNIPLQ7Z465 357 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 TP53I13Q8NBR0 393 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 ATL2Q8NHH9 583 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 GDAP1L1Q96MZ0 367 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 WRAP53Q9BUR4 548 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 CPEB1Q9BZB8 566 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 EDEM3Q9BZQ6 932 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 FOXP3Q9BZS1 431 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 SIX2Q9NPC8 291 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 MBNL1Q9NR56 388 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 DNAI1Q9UI46 699 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 AJAP1Q9UKB5 411 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 GPR34Q9UPC5 381 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 SCN8AQ9UQD0 1980 aa14.36□□□□□ -0.11
CHMP1A-210ENST00000551981 LRP4O75096 1905 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 FLNCQ14315 2725 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 NVLO15381 856 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 IGSF6O95976 241 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 CELA2BP08218 269 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 CYP11B1P15538 503 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 CCL7P80098 99 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 ATP11AP98196 1134 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 ELP6Q0PNE2 266 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 LRRC14Q15048 493 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 IRF4Q15306 451 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 KLHL40Q2TBA0 621 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms