RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 SF3A2Q15428 464 aaKnown RBP17.76■□□□□ 0.43
CDK4-210ENST00000551888 MEI1Q5TIA1 1274 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 SYT12Q8IV01 421 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 UBL4BQ8N7F7 174 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 C1orf216Q8TAB5 229 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 NSMCE1Q8WV22 266 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 SNX19Q92543 992 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 NUDCD1Q96RS6 583 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 TUBGCP5Q96RT8 1024 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 CEP41Q9BYV8 373 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 NOD2Q9HC29 1040 aa17.76■□□□□ 0.43
CDK4-210ENST00000551888 RBM22Q9NW64 420 aaKnown RBP eCLIP17.76■□□□□ 0.434e-6■■■■□ 25.9
CDK4-210ENST00000551888 EIF2B4Q9UI10 523 aaKnown RBP17.76■□□□□ 0.43
CDK4-210ENST00000551888 PTPRZ1P23471 2315 aaPredicted RBP17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3DA0A087WVF3 549 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3IA0A087WXS9 549 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3EA0A087X179 549 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3KA0A087X1G2 549 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3FA6NER0 549 aaPredicted RBP17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3LB9A6J9 549 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TRAFD1O14545 582 aaPredicted RBP17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3HP0C7X1 549 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 NR2C2P49116 596 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 AP1S1P61966 158 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 IFI35P80217 286 aaPredicted RBP17.75■□□□□ 0.43
CDK4-210ENST00000551888 DSC2Q02487 901 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 AP1B1Q10567 949 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3GQ6DHY5 549 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 ALG1LQ6GMV1 187 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3CQ6IPX1 549 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 FBXL19Q6PCT2 694 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 ZC3H18Q86VM9 953 aaKnown RBP17.75■□□□□ 0.43
CDK4-210ENST00000551888 RGL4Q8IZJ4 473 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TBC1D3Q8IZP1 549 aaPredicted RBP17.75■□□□□ 0.43
CDK4-210ENST00000551888 ZCCHC9Q8N567 271 aaKnown RBP17.75■□□□□ 0.43
CDK4-210ENST00000551888 CNTD1Q8N815 330 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 ECHDC3Q96DC8 303 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 IL12RB2Q99665 862 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 FAM118BQ9BPY3 351 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 KDM4CQ9H3R0 1056 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 SUV39H2Q9H5I1 410 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 FSCN3Q9NQT6 498 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 DKK3Q9UBP4 350 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 PYCARDQ9ULZ3 195 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 EFR3BQ9Y2G0 817 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 FADS3Q9Y5Q0 445 aa17.75■□□□□ 0.43
CDK4-210ENST00000551888 TCRBV7S2A1N4TA0A589 114 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 APOC4-APOC2K7ER74 178 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 PPP1R12AO14974 1030 aaPredicted RBP17.74■□□□□ 0.43
CDK4-210ENST00000551888 AREL1O15033 823 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 LATO43561 262 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 LRP3O75074 770 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 JCHAINP01591 159 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 APOC2P02655 101 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 TIMP2P16035 220 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 MAT2AP31153 395 aaKnown RBP17.74■□□□□ 0.43
CDK4-210ENST00000551888 CCR5P51681 352 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 OTUD4Q01804 1114 aaKnown RBP17.74■□□□□ 0.43
CDK4-210ENST00000551888 NIPAL4Q0D2K0 466 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 TRAF2Q12933 501 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 GRM3Q14832 879 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 NOMO1Q15155 1222 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 CSRP2Q16527 193 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 SEL1L3Q68CR1 1132 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 TRIM69Q86WT6 500 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 BBS5Q8N3I7 341 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 ARRDC2Q8TBH0 407 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 ACTL9Q8TC94 416 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 P3H4Q92791 437 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 ZNF641Q96N77 438 aaPredicted RBP17.74■□□□□ 0.43
CDK4-210ENST00000551888 ALS2CR12Q96Q35 445 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 SEMA3CQ99985 751 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 MIR1-1HGQ9H1L0 117 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 ATP13A3Q9H7F0 1226 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 C10orf88Q9H8K7 445 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 PREBQ9HCU5 417 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 SCUBE2Q9NQ36 999 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 VPS45Q9NRW7 570 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 RXFP3Q9NSD7 469 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 ZFR2Q9UPR6 939 aaKnown RBP17.74■□□□□ 0.43
CDK4-210ENST00000551888 ATP8A1Q9Y2Q0 1164 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 TTLL3Q9Y4R7 772 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 CFAP54Q96N23 3096 aa17.74■□□□□ 0.43
CDK4-210ENST00000551888 DMXL1Q9Y485 3027 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 USP27XA6NNY8 438 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 WNT9AO14904 365 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 RNGTTO60942 597 aaKnown RBP17.73■□□□□ 0.43
CDK4-210ENST00000551888 PRKCGP05129 697 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 ZNF806P0C7X5 589 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 SERPINA4P29622 427 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 CCDC173Q0VFZ6 552 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 KLF1Q13351 362 aaPredicted RBP17.73■□□□□ 0.43
CDK4-210ENST00000551888 WDR45BQ5MNZ6 344 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 SYCP2LQ5T4T6 812 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 PRR23CQ6ZRP0 262 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.73■□□□□ 0.43
CDK4-210ENST00000551888 QKIQ96PU8 341 aaKnown RBP eCLIP17.73■□□□□ 0.43
CDK4-210ENST00000551888 TLR10Q9BXR5 811 aa17.73■□□□□ 0.43
CDK4-210ENST00000551888 POLR1EQ9GZS1 481 aaKnown RBP17.73■□□□□ 0.43
CDK4-210ENST00000551888 PCDHGC4Q9Y5F7 938 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms