RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LRIG1Q96JA1 1093 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 LOXL4Q96JB6 756 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 CDHR1Q96JP9 859 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ZNF668Q96K58 619 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 ZNF558Q96NG5 402 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 NEU1Q99519 415 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 RIT2Q99578 217 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PRPF18Q99633 342 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 SH2D3AQ9BRG2 576 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 LZTS2Q9BRK4 669 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 SSBP3Q9BWW4 388 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PCDHAC1Q9H158 963 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 UNC45AQ9H3U1 944 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 FZD8Q9H461 694 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 TBC1D17Q9HA65 648 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 TRPV4Q9HBA0 871 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 TMEM8AQ9HCN3 771 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 KCNMB3Q9NPA1 279 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 TRPV5Q9NQA5 729 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 AGPAT5Q9NUQ2 364 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 AURKAIP1Q9NWT8 199 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 IGSF9Q9P2J2 1179 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 DNMT3BQ9UBC3 853 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 CACNG4Q9UBN1 327 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 KCNE5Q9UJ90 142 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 RALYQ9UKM9 306 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 FBXO4Q9UKT5 387 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ZNF215Q9UL58 517 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 NDRG4Q9ULP0 352 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 GTF2A1LQ9UNN4 478 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 HPSEQ9Y251 543 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 TBC1D30Q9Y2I9 924 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 MRPS17Q9Y2R5 130 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 PCDHB7Q9Y5E2 793 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PCDHGB3Q9Y5G1 929 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PCDHA10Q9Y5I2 948 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 CDY1Q9Y6F8 540 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 DGKBQ9Y6T7 804 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 DOCK6Q96HP0 2047 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ATMQ13315 3056 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 APC2O95996 2303 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 COL4A2P08572 1712 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 MYH8P13535 1937 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 LOXHD1Q8IVV2 1947 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 COL12A1Q99715 3063 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 A0A0B4J269 797 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 A0A1B0GUA9 196 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 A0A1W2PS29 197 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ARHGEF37A1IGU5 675 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 GAGE12BA1L429 117 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 FSD2A1L4K1 749 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 GAGE12HA6NDE8 117 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SMCO2A6NFE2 343 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 AQP12BA6NM10 295 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 C10orf142B7Z368 130 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SLC30A4O14863 429 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 MAGEB2O15479 319 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 IRAK2O43187 625 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 RRP9O43818 475 aaKnown RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 SLC37A4O43826 429 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SH3BP5O60239 455 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SRGAP2O75044 1071 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CSPG5O95196 566 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CTDNEP1O95476 244 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ITGB3P05106 788 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CFIP05156 583 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ADRB2P07550 413 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 DCNP07585 359 aaKnown RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 ELANEP08246 267 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ITGA2BP08514 1039 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 DHRS4L1P0CG22 281 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SRGAP2BP0DMP2 458 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 FDPSP14324 419 aaKnown RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 ACRV1P26436 265 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CD6P30203 668 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 PPIFP30405 207 aaKnown RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 ARL2P36404 184 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 METAP2P50579 478 aaKnown RBP eCLIP2.56□□□□□ -2
CPSF6-207ENST00000551516 ARL4CP56559 192 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 PTENP60484 403 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CXADRP78310 365 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 PRKCEQ02156 737 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SP4Q02446 784 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 OCA2Q04671 838 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 PLP2Q04941 152 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 NSUN2Q08J23 767 aaKnown RBP eCLIP2.56□□□□□ -2
CPSF6-207ENST00000551516 GALNT1Q10472 559 aaPredicted RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 FOXO1Q12778 655 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TUBB3Q13509 450 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CCNIQ14094 377 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TOB2Q14106 344 aaPredicted RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 SMC1AQ14683 1233 aaKnown RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 ICAM4Q14773 271 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 POSTNQ15063 836 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CYP2A13Q16696 494 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ZIK1Q3SY52 487 aaPredicted RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 ARHGAP15Q53QZ3 475 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ALFQ53S48 1182 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms