RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 EIF2B5Q13144 721 aaKnown RBP13.6□□□□□ -0.23
GCN1-206ENST00000549815 SGCGQ13326 291 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 PDE1CQ14123 709 aaPredicted RBP13.6□□□□□ -0.23
GCN1-206ENST00000549815 RTP5Q14D33 572 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 COL28A1Q2UY09 1125 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 LRRC73Q5JTD7 316 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 PARGQ86W56 976 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 COL27A1Q8IZC6 1860 aaPredicted RBP13.6□□□□□ -0.23
GCN1-206ENST00000549815 DCBLD1Q8N8Z6 715 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 FAM181AQ8N9Y4 354 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 FNIP1Q8TF40 1166 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 ARHGEF26Q96DR7 871 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 SNRNP25Q9BV90 132 aaKnown RBP13.6□□□□□ -0.23
GCN1-206ENST00000549815 CPEB1Q9BZB8 566 aaKnown RBP13.6□□□□□ -0.23
GCN1-206ENST00000549815 TRIM7Q9C029 511 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 DNAJC28Q9NX36 388 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 NLGN3Q9NZ94 848 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 PNMA8BQ9ULN7 279 aaPredicted RBP13.6□□□□□ -0.23
GCN1-206ENST00000549815 AP4E1Q9UPM8 1137 aa13.6□□□□□ -0.23
GCN1-206ENST00000549815 A0A087WV48 116 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 EIF3CLB5ME19 914 aaKnown RBP13.59□□□□□ -0.23
GCN1-206ENST00000549815 J3KR12 359 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 K7ESM1 405 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 PRAMEF11O60813 436 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 MMP20O60882 483 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 NEBLO76041 1014 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 PIGNO95427 931 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 MYF5P13349 255 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 DAB2P98082 770 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 RAD51Q06609 339 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 NR1I3Q14994 352 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 ASIC2Q16515 512 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 TMEM52BQ4KMG9 183 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 AFMIDQ63HM1 303 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 TTC7BQ86TV6 843 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 ARHGAP12Q8IWW6 846 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 TP53I13Q8NBR0 393 aaPredicted RBP13.59□□□□□ -0.23
GCN1-206ENST00000549815 ZNF548Q8NEK5 533 aaPredicted RBP13.59□□□□□ -0.23
GCN1-206ENST00000549815 HCAR2Q8TDS4 363 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 NXPE2Q96DL1 559 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 APOLD1Q96LR9 279 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
GCN1-206ENST00000549815 EIF3CQ99613 913 aaKnown RBP13.59□□□□□ -0.23
GCN1-206ENST00000549815 SLC39A8Q9C0K1 460 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 NRSN2Q9GZP1 204 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 MBNL1Q9NR56 388 aaKnown RBP13.59□□□□□ -0.23
GCN1-206ENST00000549815 UBA2Q9UBT2 640 aaPredicted RBP13.59□□□□□ -0.23
GCN1-206ENST00000549815 CSNK1G3Q9Y6M4 447 aa13.59□□□□□ -0.23
GCN1-206ENST00000549815 NEMP2A6NFY4 417 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 EEF2KO00418 725 aaKnown RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 NEMP1O14524 444 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 TLX3O43711 291 aaPredicted RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 BUB1BO60566 1050 aaPredicted RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 LRCH4O75427 683 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 TM7SF2O76062 418 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 FTLP02792 175 aaPredicted RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 ALPPL2P10696 532 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 ERCC2P18074 760 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 MIPP30301 263 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 ZNF165P49910 485 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 PAPOLAP51003 745 aaKnown RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 SUOXP51687 545 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 E2F1Q01094 437 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 FILIP1LQ4L180 1135 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 FIGNQ5HY92 759 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 ERMARDQ5T6L9 678 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 CDCP2Q5VXM1 449 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 ZSWIM9Q86XI8 627 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 CELF6Q96J87 481 aaKnown RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 DUSP23Q9BVJ7 150 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 EDEM3Q9BZQ6 932 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 DHX35Q9H5Z1 703 aaKnown RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 CNOT8Q9UFF9 292 aaKnown RBP13.58□□□□□ -0.24
GCN1-206ENST00000549815 PCSK1NQ9UHG2 260 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 CLCA2Q9UQC9 943 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 ANKRD36A6QL64 1941 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 IGSF10Q6WRI0 2623 aa13.58□□□□□ -0.24
GCN1-206ENST00000549815 H3BM21 787 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 AQP9O43315 295 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 MT-CO3P00414 261 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 GP1BAP07359 652 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 JUNDP17535 347 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 DESP17661 470 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 RGRP47804 291 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 CSNK1DP48730 415 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 YPEL5P62699 121 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 KLHL40Q2TBA0 621 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 HS1BP3Q53T59 392 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 HGSNATQ68CP4 663 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 ARHGAP36Q6ZRI8 547 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 RFX8Q6ZV50 586 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 PDZD3Q86UT5 571 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 PSTKQ8IV42 348 aaKnown RBP13.57□□□□□ -0.24
GCN1-206ENST00000549815 RBFAQ8N0V3 343 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms