RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TCEA3O75764 348 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 MMEP08473 750 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 THOP1P52888 689 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 NOMO3P69849 1222 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 SRSF6Q13247 344 aaKnown RBP16.69■□□□□ 0.26
SSH1-208ENST00000548522 MIIPQ5JXC2 388 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 NAA35Q5VZE5 725 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 KCTD16Q68DU8 428 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 RWDD4Q6NW29 188 aaKnown RBP16.69■□□□□ 0.26
SSH1-208ENST00000548522 CLEC14AQ86T13 490 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 TP53I13Q8NBR0 393 aaPredicted RBP16.69■□□□□ 0.26
SSH1-208ENST00000548522 ASB12Q8WXK4 309 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 RAB7BQ96AH8 199 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 FUCA2Q9BTY2 467 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 WRAP53Q9BUR4 548 aaKnown RBP16.69■□□□□ 0.26
SSH1-208ENST00000548522 SIRPGQ9P1W8 387 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 KIAA1468Q9P260 1216 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 CAPN8A6NHC0 703 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 EFSO43281 561 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 GSRP00390 522 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 SPIDRQ14159 915 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 IRF4Q15306 451 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 MAN2A1Q16706 1144 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 MYLK3Q32MK0 819 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 ACBD5Q5T8D3 534 aaPredicted RBP16.68■□□□□ 0.26
SSH1-208ENST00000548522 MACC1Q6ZN28 852 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 CCDC185Q8N715 623 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 TPCN2Q8NHX9 752 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 WDR36Q8NI36 951 aaKnown RBP16.68■□□□□ 0.26
SSH1-208ENST00000548522 PCDH19Q8TAB3 1148 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 SLC20A1Q8WUM9 679 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 BTN2A2Q8WVV5 523 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 NAT6Q93015 286 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 EPAS1Q99814 870 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 FOXP3Q9BZS1 431 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 RBSNQ9H1K0 784 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 NUP62CLQ9H1M0 184 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 CLSTN2Q9H4D0 955 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 WDR70Q9NW82 654 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 OR12D3Q9UGF7 316 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 PADI4Q9UM07 663 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 COQ6Q9Y2Z9 468 aa16.68■□□□□ 0.26
SSH1-208ENST00000548522 CCDC187A0A096LP49 1063 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 NTN3O00634 580 aaPredicted RBP16.67■□□□□ 0.26
SSH1-208ENST00000548522 TMCC1O94876 653 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 LRIG2O94898 1065 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 ANXA6P08133 673 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 HGFP14210 728 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 RHOQP17081 205 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 ADRA1BP35368 520 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 EIF4A3P38919 411 aaKnown RBP16.67■□□□□ 0.26
SSH1-208ENST00000548522 RPIAP49247 311 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 BPIFB4P59827 614 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 POLD3Q15054 466 aaPredicted RBP16.67■□□□□ 0.26
SSH1-208ENST00000548522 CCDC14Q49A88 953 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 FAXCQ5TGI0 409 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 GDPD4Q6W3E5 623 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 CCDC81Q6ZN84 652 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 ZSCAN30Q86W11 494 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 PLPP6Q8IY26 295 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 ARL14Q8N4G2 192 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 JOSD2Q8TAC2 188 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 EPS8L1Q8TE68 723 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 CCDC74AQ96AQ1 378 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 GRAMD1AQ96CP6 724 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 MED8Q96G25 268 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 PDLIM2Q96JY6 352 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 NAA15Q9BXJ9 866 aaKnown RBP16.67■□□□□ 0.26
SSH1-208ENST00000548522 SLC13A1Q9BZW2 595 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 KLC2Q9H0B6 622 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 NDST4Q9H3R1 872 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 TMEM248Q9NWD8 314 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 GULP1Q9UBP9 304 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 NAV2Q8IVL1 2488 aa16.67■□□□□ 0.26
SSH1-208ENST00000548522 COL12A1Q99715 3063 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 AHCTF1Q8WYP5 2266 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 SPTA1P02549 2419 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 AGRPO00253 132 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 INSIG1O15503 277 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 SLC28A2O43868 658 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 RAMP2O60895 175 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 LSM8O95777 96 aaKnown RBP16.66■□□□□ 0.26
SSH1-208ENST00000548522 ITGA2BP08514 1039 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
SSH1-208ENST00000548522 MAPKAPK2P49137 400 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 SNRPD1P62314 119 aaKnown RBP16.66■□□□□ 0.26
SSH1-208ENST00000548522 PTK2BQ14289 1009 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 TGIF1Q15583 401 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 ALG11Q2TAA5 492 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 VWA3BQ502W6 1294 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 KLHDC7AQ5VTJ3 777 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 TTC7BQ86TV6 843 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 ARL10Q8N8L6 244 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 RXFP2Q8WXD0 754 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 TSACCQ96A04 125 aaPredicted RBP16.66■□□□□ 0.26
SSH1-208ENST00000548522 EXOC2Q96KP1 924 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 OSBPL1AQ9BXW6 950 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 NOL6Q9H6R4 1146 aaKnown RBP16.66■□□□□ 0.26
SSH1-208ENST00000548522 EPB41L5Q9HCM4 733 aa16.66■□□□□ 0.26
SSH1-208ENST00000548522 A0A1W2PQM1 296 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms