RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 VAT1Q99536 393 aa17.63■□□□□ 0.41
HDAC7-227ENST00000548080 ACE2Q9BYF1 805 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-227ENST00000548080 FAM126AQ9BYI3 521 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-227ENST00000548080 MAGEH1Q9H213 219 aa17.63■□□□□ 0.41
HDAC7-227ENST00000548080 TNKS2Q9H2K2 1166 aa17.63■□□□□ 0.41
HDAC7-227ENST00000548080 RAB6BQ9NRW1 208 aa17.63■□□□□ 0.41
HDAC7-227ENST00000548080 EBF1Q9UH73 591 aa17.63■□□□□ 0.41
HDAC7-227ENST00000548080 SUN2Q9UH99 717 aa17.63■□□□□ 0.41
HDAC7-227ENST00000548080 TRHDEQ9UKU6 1024 aa17.63■□□□□ 0.41
HDAC7-227ENST00000548080 CYP8B1Q9UNU6 501 aa17.63■□□□□ 0.41
HDAC7-227ENST00000548080 FCF1Q9Y324 198 aaKnown RBP17.63■□□□□ 0.41
HDAC7-227ENST00000548080 ABCA7Q8IZY2 2146 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 EDDM13A0A1B0GTR0 161 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 MATN3O15232 486 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 LILRB5O75023 590 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 FDFT1P37268 417 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 HSPA9P38646 679 aaKnown RBP17.62■□□□□ 0.41
HDAC7-227ENST00000548080 NNMTP40261 264 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 DHX9Q08211 1270 aaKnown RBP17.62■□□□□ 0.41
HDAC7-227ENST00000548080 CASP8Q14790 479 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 E2F5Q15329 346 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 TEX44Q53QW1 395 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 FAM182AQ5T1J6 154 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 C9orf64Q5T6V5 341 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 TMC3Q7Z5M5 1100 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 ZNF567Q8N184 647 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 NAT8LQ8N9F0 302 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 PRCCQ92733 491 aaPredicted RBP17.62■□□□□ 0.41
HDAC7-227ENST00000548080 PTPRN2Q92932 1015 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 ETNK1Q9HBU6 452 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 IPO11Q9UI26 975 aaKnown RBP17.62■□□□□ 0.41
HDAC7-227ENST00000548080 USP34Q70CQ2 3546 aa17.62■□□□□ 0.41
HDAC7-227ENST00000548080 ATP9BO43861 1147 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 PPFIA2O75334 1257 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 RPP40O75818 363 aaKnown RBP17.61■□□□□ 0.41
HDAC7-227ENST00000548080 METTL18O95568 372 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 CD160O95971 181 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 JCHAINP01591 159 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 BCKDHBP21953 392 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 IFI35P80217 286 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-227ENST00000548080 ZBTB17Q13105 803 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 SERINC3Q13530 473 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 SLMAPQ14BN4 828 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 PARP6Q2NL67 630 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 ANKRD22Q5VYY1 191 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 ZC3H14Q6PJT7 736 aaKnown RBP17.61■□□□□ 0.41
HDAC7-227ENST00000548080 CEP128Q6ZU80 1094 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 CEP68Q76N32 757 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 PID1Q7Z2X4 250 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 ZCCHC9Q8N567 271 aaKnown RBP17.61■□□□□ 0.41
HDAC7-227ENST00000548080 OR2T3Q8NH03 318 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 FATE1Q969F0 183 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 SIPA1Q96FS4 1042 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 CEP41Q9BYV8 373 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 TXLNGYQ9BZA5 131 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 IRF2BPLQ9H1B7 796 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 KLHL8Q9P2G9 620 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-227ENST00000548080 HS3ST2Q9Y278 367 aa17.61■□□□□ 0.41
HDAC7-227ENST00000548080 SHROOM3Q8TF72 1996 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 J3KR12 359 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 ZBTB24O43167 697 aaPredicted RBP17.6■□□□□ 0.41
HDAC7-227ENST00000548080 CCNB1P14635 433 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 NBL1P41271 181 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 MAGEA6P43360 314 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 SERPINH1P50454 418 aaKnown RBP17.6■□□□□ 0.41
HDAC7-227ENST00000548080 METAP1P53582 386 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 RPS14P62263 151 aaKnown RBP17.6■□□□□ 0.41
HDAC7-227ENST00000548080 KCNJ11Q14654 390 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 POM121L1PQ3SYA9 428 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 FAXCQ5TGI0 409 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 C22orf39Q6P5X5 142 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 FAM124AQ86V42 546 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 CCDC25Q86WR0 208 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 MMAAQ8IVH4 418 aaKnown RBP17.6■□□□□ 0.41
HDAC7-227ENST00000548080 KDM1BQ8NB78 822 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 GAB3Q8WWW8 586 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 FAM129BQ96TA1 746 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 TM6SF2Q9BZW4 377 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 HPCAL4Q9UM19 191 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 ATP8A1Q9Y2Q0 1164 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 SPAG17Q6Q759 2223 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 NUMA1Q14980 2115 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 GPR179Q6PRD1 2367 aa17.6■□□□□ 0.41
HDAC7-227ENST00000548080 TCRBV7S3A2A0A539 114 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 MAP2K7O14733 419 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 KDELR3O43731 214 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 ETFBP38117 255 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 PSMD8P48556 350 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 SEMA5AQ13591 1074 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 SIM2Q14190 667 aaPredicted RBP17.59■□□□□ 0.41
HDAC7-227ENST00000548080 USP39Q53GS9 565 aaKnown RBP17.59■□□□□ 0.41
HDAC7-227ENST00000548080 ITPRIPL1Q6GPH6 555 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 RETSATQ6NUM9 610 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 KBTBD6Q86V97 674 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 DEFB119Q8N690 84 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 TSEN2Q8NCE0 465 aaKnown RBP17.59■□□□□ 0.41
HDAC7-227ENST00000548080 CHST14Q8NCH0 376 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 MAML1Q92585 1016 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 TEKT5Q96M29 485 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 IL12RB2Q99665 862 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms