RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 FTHL17Q9BXU8 183 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 MRPL1Q9BYD6 325 aaKnown RBP6.55□□□□□ -1.36
SNHG1-225ENST00000545920 ACE2Q9BYF1 805 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-225ENST00000545920 SLC2A11Q9BYW1 496 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 GSX2Q9BZM3 304 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 RBM38Q9H0Z9 239 aaKnown RBP6.55□□□□□ -1.36
SNHG1-225ENST00000545920 RUBCNLQ9H714 662 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 WDR41Q9HAD4 459 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 VTA1Q9NP79 307 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 SYBUQ9NX95 663 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 NCKIPSDQ9NZQ3 722 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 KLHL8Q9P2G9 620 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-225ENST00000545920 IPO11Q9UI26 975 aaKnown RBP6.55□□□□□ -1.36
SNHG1-225ENST00000545920 KCNH4Q9UQ05 1017 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 AAR2Q9Y312 384 aaKnown RBP6.55□□□□□ -1.36
SNHG1-225ENST00000545920 TELO2Q9Y4R8 837 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 AP4B1Q9Y6B7 739 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 COL4A5P29400 1685 aa6.55□□□□□ -1.36
SNHG1-225ENST00000545920 KIAA1217Q5T5P2 1943 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ZCWPW2A0A1B0GU75 182 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 KANSL1LA0AUZ9 987 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TRIM64CA6NLI5 447 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 MEI4A8MW99 385 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 FZD9O00144 591 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 EEF2KO00418 725 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TXNDC9O14530 226 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TNPO2O14787 897 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ZBTB14O43829 449 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TSPAN1O60635 241 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 LYPLA1O75608 230 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ANXA9O76027 345 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 BMP10O95393 424 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CRTAMO95727 393 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 KCNE1P15382 129 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 DPEP1P16444 411 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 HOXB6P17509 224 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ATP5F1P24539 256 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 PSMB4P28070 264 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SLC7A1P30825 629 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 RGS7P49802 495 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 GMPSP49915 693 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 NUDT2P50583 147 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CDK9P50750 372 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CLCN3P51790 818 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 INHBCP55103 352 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SESN2P58004 480 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 OSTNP61366 133 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 POU4F1Q01851 419 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 RHDQ02161 417 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SULT2A1Q06520 285 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 NSUN2Q08J23 767 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 GALNT2Q10471 571 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SEMA3BQ13214 749 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 DCTN2Q13561 401 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CCINQ13939 588 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TRIM25Q14258 630 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 KCTD2Q14681 263 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 LY6KQ17RY6 165 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 HSDL1Q3SXM5 330 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 KCTD21Q4G0X4 260 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 DALRD3Q5D0E6 543 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 XKR4Q5GH76 650 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 MDH1BQ5I0G3 518 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 PCID2Q5JVF3 399 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SAMD4BQ5PRF9 694 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 FAM45BPQ6NSW5 357 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 RWDD4Q6NW29 188 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 NOTUMQ6P988 496 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SLC27A1Q6PCB7 646 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 DHRS4L2Q6PKH6 230 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 RNF111Q6ZNA4 994 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 EP400NLQ6ZTU2 488 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CHSY3Q70JA7 882 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 PID1Q7Z2X4 250 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ACOT1Q86TX2 421 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 RSPH3Q86UC2 560 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SNX32Q86XE0 403 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 VWA5B2Q8N398 1253 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 POU5F2Q8N7G0 328 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF781Q8N8C0 355 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 LEMD2Q8NC56 503 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 FAM45AQ8TCE6 357 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 PNPT1Q8TCS8 783 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CALML6Q8TD86 181 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ADAMTS16Q8TE57 1224 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 DIS3LQ8TF46 1054 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 WNT8BQ93098 351 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 FATE1Q969F0 183 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ITFG2Q969R8 447 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ZUFSPQ96AP4 578 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 C18orf25Q96B23 403 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF669Q96BR6 464 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CCDC124Q96CT7 223 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TSPAN17Q96FV3 270 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 VPS39Q96JC1 886 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CNDP2Q96KP4 475 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TMEM74Q96NL1 305 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TCF12Q99081 682 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TRIM56Q9BRZ2 755 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SPON2Q9BUD6 331 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms