RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 KIF17Q9P2E2 1029 aa4.87□□□□□ -1.63
SNHG1-224ENST00000545688 CNPY2Q9Y2B0 182 aa4.87□□□□□ -1.63
SNHG1-224ENST00000545688 ARAP1Q96P48 1450 aa4.87□□□□□ -1.63
SNHG1-224ENST00000545688 CEP164Q9UPV0 1460 aa4.87□□□□□ -1.63
SNHG1-224ENST00000545688 MROH2BQ7Z745 1585 aa4.87□□□□□ -1.63
SNHG1-224ENST00000545688 SAA2-SAA4A0A096LPE2 208 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 NPIPB11E5RHQ5 1161 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 VNN2O95498 520 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 UMODP07911 640 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 F7P08709 466 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-224ENST00000545688 TTKP33981 857 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 DLG1Q12959 904 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 MORC3Q14149 939 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 SETMARQ53H47 684 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-224ENST00000545688 TMPRSS12Q86WS5 348 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 CCDC105Q8IYK2 499 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 MYCT1Q8N699 235 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 ANKRD44Q8N8A2 993 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 DNAAF1Q8NEP3 725 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 ZMIZ2Q8NF64 920 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 SPATA20Q8TB22 786 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 TRAPPC12Q8WVT3 735 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 IL17FQ96PD4 163 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 ENTPD7Q9NQZ7 604 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 OR6C3Q9NZP0 311 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 NFS1Q9Y697 457 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 CFTRP13569 1480 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 FANCD2Q9BXW9 1451 aa4.86□□□□□ -1.63
SNHG1-224ENST00000545688 URB2Q14146 1524 aaKnown RBP4.86□□□□□ -1.63
SNHG1-224ENST00000545688 A0A0B4J293 547 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 B9A039 149 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 IGLV2-11P01706 119 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 RXRAP19793 462 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 SSTR2P30874 369 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 PEX5P50542 639 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 ACTR2P61160 394 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 PRKG1Q13976 671 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 SLC18A3Q16572 532 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 CTXN3Q4LDR2 81 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 FAM69BQ5VUD6 431 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 DENND1BQ6P3S1 775 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 KLHL24Q6TFL4 600 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 CCDC129Q6ZRS4 1044 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 ARRDC2Q8TBH0 407 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 HSPH1Q92598 858 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 BICD1Q96G01 975 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 SCMH1Q96GD3 660 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 NODALQ96S42 347 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 PAGR1Q9BTK6 254 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 TCF7L2Q9NQB0 619 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 SPATS2LQ9NUQ6 558 aaKnown RBP4.85□□□□□ -1.63
SNHG1-224ENST00000545688 ANKRD10Q9NXR5 420 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 PAM16Q9Y3D7 125 aa4.85□□□□□ -1.63
SNHG1-224ENST00000545688 ZNF608Q9ULD9 1512 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-224ENST00000545688 CCDC194A0A1B0GVG4 234 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 PRSS47A8MTI9 375 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 DHRS4L1P0CG22 281 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 IGHV4-30-4P0DP06 118 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 NEK10Q6ZWH5 1172 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 ZNF771Q7L3S4 317 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-224ENST00000545688 MOGAT3Q86VF5 341 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 CHD1LQ86WJ1 897 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 TMEM57Q8N5G2 664 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 SAMD3Q8N6K7 520 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 TMEM170AQ8WVE7 144 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 FAM167BQ9BTA0 163 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 IFT80Q9P2H3 777 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-224ENST00000545688 FEM1BQ9UK73 627 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 DNAJC16Q9Y2G8 782 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 RIPOR2Q9Y4F9 1068 aa4.84□□□□□ -1.63
SNHG1-224ENST00000545688 RSF1Q96T23 1441 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-224ENST00000545688 MAGEA13PA6NCF6 341 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 PRAC2D3DTV9 90 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 BMPR1BO00238 502 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 TULP2O00295 520 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 CLGNO14967 610 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 TFPIP10646 304 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 TCEA1P23193 301 aaKnown RBP4.83□□□□□ -1.64
SNHG1-224ENST00000545688 LIFRP42702 1097 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 MEX3BQ6ZN04 569 aaKnown RBP4.83□□□□□ -1.64
SNHG1-224ENST00000545688 SFTPA2Q8IWL1 248 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 CEP70Q8NHQ1 597 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 GDPD5Q8WTR4 605 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 LMAN2LQ9H0V9 348 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 SDF2L1Q9HCN8 221 aa4.83□□□□□ -1.64
SNHG1-224ENST00000545688 ERRFI1Q9UJM3 462 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-224ENST00000545688 RRP7AQ9Y3A4 280 aaKnown RBP4.83□□□□□ -1.64
SNHG1-224ENST00000545688 ADGRF5Q8IZF2 1346 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 hDV102S1A0JD36 115 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 EBAG9O00559 213 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 ATP2C2O75185 946 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 CXCR3P49682 368 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 CALCRLQ16602 461 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 OTUD3Q5T2D3 398 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-224ENST00000545688 IL20RBQ6UXL0 311 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 LURAP1LQ8IV03 231 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 NAGSQ8N159 534 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 POC1AQ8NBT0 407 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 SORCS1Q8WY21 1168 aa4.82□□□□□ -1.64
SNHG1-224ENST00000545688 LRFN5Q96NI6 719 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms