RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 JMJD7P0C870 316 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 KRT5P13647 590 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 TFE3P19532 575 aaPredicted RBP14.93□□□□□ -0.02
RTN3-214ENST00000545432 ITIH1P19827 911 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 ETV5P41161 510 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 AGERQ15109 404 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 TTI2Q6NXR4 508 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 LRRC31Q6UY01 552 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 PCDH19Q8TAB3 1148 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 DHTKD1Q96HY7 919 aaPredicted RBP14.93□□□□□ -0.02
RTN3-214ENST00000545432 HAPLN3Q96S86 360 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 CPEB1Q9BZB8 566 aaKnown RBP14.93□□□□□ -0.02
RTN3-214ENST00000545432 RETREG1Q9H6L5 497 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 UBE2TQ9NPD8 197 aaPredicted RBP14.93□□□□□ -0.02
RTN3-214ENST00000545432 PPARGC1AQ9UBK2 798 aaKnown RBP14.93□□□□□ -0.02
RTN3-214ENST00000545432 GULP1Q9UBP9 304 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 ITM2BQ9Y287 266 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 FCF1Q9Y324 198 aaKnown RBP14.93□□□□□ -0.02
RTN3-214ENST00000545432 ZDHHC9Q9Y397 364 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 SNX10Q9Y5X0 201 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 TM7SF2O76062 418 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 GSRP00390 522 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 ERBB2P04626 1255 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 GLB1P16278 677 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 CASRP41180 1078 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 CYP4F2P78329 520 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 GNA12Q03113 381 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 ALG11Q2TAA5 492 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 TFAP2DQ7Z6R9 452 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 VASH2Q86V25 355 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 ZDHHC17Q8IUH5 632 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 FMR1NBQ8N0W7 255 aaPredicted RBP14.92□□□□□ -0.02
RTN3-214ENST00000545432 C1orf131Q8NDD1 294 aaKnown RBP14.92□□□□□ -0.02
RTN3-214ENST00000545432 ARHGEF2Q92974 986 aaKnown RBP14.92□□□□□ -0.02
RTN3-214ENST00000545432 USP7Q93009 1102 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 CCDC34Q96HJ3 373 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 CMKLR1Q99788 373 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 OSBPL1AQ9BXW6 950 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 INTS2Q9H0H0 1204 aaKnown RBP14.92□□□□□ -0.02
RTN3-214ENST00000545432 EPN3Q9H201 632 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 GPR34Q9UPC5 381 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 MAN2B2Q9Y2E5 1009 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 PCDHB11Q9Y5F2 797 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 ACTL7AQ9Y615 435 aa14.92□□□□□ -0.02
RTN3-214ENST00000545432 RASGRP1O95267 797 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 POP4O95707 220 aaKnown RBP14.91□□□□□ -0.02
RTN3-214ENST00000545432 GKP32189 559 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 SCNN1AP37088 669 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 MYLK3Q32MK0 819 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 PTPN20Q4JDL3 420 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 CERCAMQ5T4B2 595 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 TMPRSS9Q7Z410 1059 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 VPS36Q86VN1 386 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 GKN2Q86XP6 184 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 CCNJLQ8IV13 435 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 OR2AP1Q8NGE2 309 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 FAM81BQ96LP2 452 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 RBM15Q96T37 977 aaKnown RBP eCLIP14.91□□□□□ -0.022e-15■■■■■ 29.5
RTN3-214ENST00000545432 SPON2Q9BUD6 331 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 C1QTNF7Q9BXJ2 289 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 SCAND2PQ9GZW5 306 aaPredicted RBP14.91□□□□□ -0.02
RTN3-214ENST00000545432 CDH19Q9H159 772 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 ZDHHC6Q9H6R6 413 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 ATP13A1Q9HD20 1204 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 DKK3Q9UBP4 350 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 ANAPC2Q9UJX6 822 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 MFHAS1Q9Y4C4 1052 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 PAXBP1Q9Y5B6 917 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 PCDHGA3Q9Y5H0 932 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 DGKBQ9Y6T7 804 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 DOCK4Q8N1I0 1966 aa14.91□□□□□ -0.02
RTN3-214ENST00000545432 UNC79Q9P2D8 2635 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 NEMP1O14524 444 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 PSMA7O14818 248 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 MMP20O60882 483 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 TIMP2P16035 220 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
RTN3-214ENST00000545432 GABRB2P47870 512 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 DNA2P51530 1060 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 ARSDP51689 593 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 SNX16P57768 344 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 NRG1Q02297 640 aaPredicted RBP14.9□□□□□ -0.02
RTN3-214ENST00000545432 CLPPQ16740 277 aaPredicted RBP14.9□□□□□ -0.02
RTN3-214ENST00000545432 KLHL40Q2TBA0 621 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 WSCD2Q2TBF2 565 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 SLC25A52Q3SY17 297 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 CCDC40Q4G0X9 1142 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 TMEM52BQ4KMG9 183 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 SPRED1Q7Z699 444 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 C17orf82Q86X59 251 aaPredicted RBP14.9□□□□□ -0.02
RTN3-214ENST00000545432 SHC3Q92529 594 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 TSACCQ96A04 125 aaPredicted RBP14.9□□□□□ -0.02
RTN3-214ENST00000545432 ZYG11BQ9C0D3 744 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 SYNDIG1Q9H7V2 258 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 TMPRSS4Q9NRS4 437 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.9□□□□□ -0.02
RTN3-214ENST00000545432 STAP1Q9ULZ2 295 aa14.9□□□□□ -0.02
RTN3-214ENST00000545432 CHD5Q8TDI0 1954 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 SPTBN1Q01082 2364 aaKnown RBP14.89□□□□□ -0.03
RTN3-214ENST00000545432 ETFBP38117 255 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms