RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 H3BNX3 289 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 VAPBO95292 243 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 CHRNGP07510 517 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 BDNFP23560 247 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 PSMD8P48556 350 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 TNK2Q07912 1038 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 SLC14A2Q15849 920 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 PIGGQ5H8A4 983 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 SLC22A9Q8IVM8 553 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 GALNT15Q8N3T1 639 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 C3orf58Q8NDZ4 430 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 CCDC124Q96CT7 223 aaKnown RBP23.47■■□□□ 1.35
FOXA1-202ENST00000545425 SERPINB11Q96P15 392 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 OSER1Q9NX31 292 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 ADAMTS6Q9UKP5 1117 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 FBXO5Q9UKT4 447 aa23.47■■□□□ 1.35
FOXA1-202ENST00000545425 E2F8A0AVK6 867 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 PHGDHO43175 533 aaKnown RBP23.46■■□□□ 1.35
FOXA1-202ENST00000545425 PAGE1O75459 146 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 MYCNP04198 464 aaPredicted RBP23.46■■□□□ 1.35
FOXA1-202ENST00000545425 SCNN1GP51170 649 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 NDST2P52849 883 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 ROR2Q01974 943 aaKnown RBP23.46■■□□□ 1.35
FOXA1-202ENST00000545425 TRIP10Q15642 601 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 LSMEM2Q8N112 164 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 KDM1BQ8NB78 822 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 ADCY4Q8NFM4 1077 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 MIOSQ9NXC5 875 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 UBP1Q9NZI7 540 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 ZDHHC2Q9UIJ5 367 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 TIMM13Q9Y5L4 95 aaPredicted RBP23.46■■□□□ 1.35
FOXA1-202ENST00000545425 SNX10Q9Y5X0 201 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 SHROOM3Q8TF72 1996 aa23.46■■□□□ 1.35
FOXA1-202ENST00000545425 DENRO43583 198 aaKnown RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 PGK1P00558 417 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 VCLP18206 1134 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 ME2P23368 584 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 RENBPP51606 427 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 BEX3Q00994 111 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 TUSC3Q13454 348 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 ART3Q13508 389 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 ZNF423Q2M1K9 1284 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 NEPROQ6NW34 567 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 ACVR1CQ8NER5 493 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 RIN3Q8TB24 985 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 SLC39A8Q9C0K1 460 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 PAPOLBQ9NRJ5 636 aaKnown RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 RBM22Q9NW64 420 aaKnown RBP eCLIP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 SLC4A7Q9Y6M7 1214 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 CCDC189A1A4V9 331 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 AIM2O14862 343 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 PAPOLAP51003 745 aaKnown RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 MGAT3Q09327 533 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 STX5Q13190 355 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 POU6F1Q14863 301 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 ESRP1Q6NXG1 681 aaKnown RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 RNF111Q6ZNA4 994 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 SERINC5Q86VE9 423 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 ZNF483Q8TF39 744 aaPredicted RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 PEX13Q92968 403 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 ELMO2Q96JJ3 720 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 FCRL2Q96LA5 508 aaPredicted RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 LBHD1Q9BQE6 289 aaPredicted RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 EPB41L1Q9H4G0 881 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 EBF3Q9H4W6 596 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 WDR55Q9H6Y2 383 aaPredicted RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 ATP13A1Q9HD20 1204 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 RAB26Q9ULW5 256 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 MAGED2Q9UNF1 606 aaPredicted RBP23.45■■□□□ 1.34
FOXA1-202ENST00000545425 TBC1D30Q9Y2I9 924 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 DTNAQ9Y4J8 743 aa23.45■■□□□ 1.34
FOXA1-202ENST00000545425 KCNU1A8MYU2 1149 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 CPB1P15086 417 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 ARNTP27540 789 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 SLC1A2P43004 574 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 ALDH1A3P47895 512 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 LEPRP48357 1165 aaKnown RBP23.44■■□□□ 1.34
FOXA1-202ENST00000545425 PFKPQ01813 784 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 SMAD1Q15797 465 aaKnown RBP23.44■■□□□ 1.34
FOXA1-202ENST00000545425 MMEL1Q495T6 779 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 TCHHL1Q5QJ38 904 aaPredicted RBP23.44■■□□□ 1.34
FOXA1-202ENST00000545425 OVOS1Q6IE37 1185 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 MSANTD2Q6P1R3 559 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 CHSY3Q70JA7 882 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 SPATA22Q8NHS9 363 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 USP33Q8TEY7 942 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 SUSD3Q96L08 255 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 NUF2Q9BZD4 464 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 EPS15L1Q9UBC2 864 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 CNOT11Q9UKZ1 510 aaKnown RBP23.44■■□□□ 1.34
FOXA1-202ENST00000545425 PTPRDP23468 1912 aa23.44■■□□□ 1.34
FOXA1-202ENST00000545425 CEP290O15078 2479 aa23.43■■□□□ 1.34
FOXA1-202ENST00000545425 EIF4E1BA6NMX2 242 aaKnown RBP23.43■■□□□ 1.34
FOXA1-202ENST00000545425 INPPL1O15357 1258 aa23.43■■□□□ 1.34
FOXA1-202ENST00000545425 BCAS2O75934 225 aaPredicted RBP23.43■■□□□ 1.34
FOXA1-202ENST00000545425 CAPNS1P04632 268 aa23.43■■□□□ 1.34
FOXA1-202ENST00000545425 UBTFL6P0CB48 400 aaPredicted RBP23.43■■□□□ 1.34
FOXA1-202ENST00000545425 EPHA3P29320 983 aa23.43■■□□□ 1.34
FOXA1-202ENST00000545425 GMPRP36959 345 aa23.43■■□□□ 1.34
FOXA1-202ENST00000545425 ABCG1P45844 678 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms