RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 LINGO4Q6UY18 593 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 H2AFVQ71UI9 128 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 CNGA4Q8IV77 575 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 PCDH20Q8N6Y1 951 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 TMIEQ8NEW7 156 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 OR2T34Q8NGX1 318 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 OR14C36Q8NHC7 312 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 PIP4K2CQ8TBX8 421 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 CTNNBL1Q8WYA6 563 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 SNX19Q92543 992 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ISG20Q96AZ6 181 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 CCDC42Q96M95 316 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 NSUN5Q96P11 429 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 SNRNP25Q9BV90 132 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 NUP85Q9BW27 656 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ACE2Q9BYF1 805 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 C6orf106Q9H6K1 298 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ZWILCHQ9H900 591 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 DYRK4Q9NR20 520 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 RXFP3Q9NSD7 469 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ABHD10Q9NUJ1 306 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 EIF2B4Q9UI10 523 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 LCMT1Q9UIC8 334 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ANAPC7Q9UJX3 599 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 PPM1HQ9ULR3 514 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3DA0A087WVF3 549 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3IA0A087WXS9 549 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3EA0A087X179 549 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3KA0A087X1G2 549 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3FA6NER0 549 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ARHGAP42A6NI28 874 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 C4orf47A7E2U8 309 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3LB9A6J9 549 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 RASA4BC9J798 803 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 AKR1B15C9JRZ8 316 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 RASA4O43374 803 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 BUB1O43683 1085 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 MFAP3LO75121 409 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3HP0C7X1 549 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 CD27P26842 260 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ADH6P28332 368 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ACVRL1P37023 503 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ARL4AP40617 200 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 SSR1P43307 286 aaKnown RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 HCAR3P49019 387 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 CCR5P51681 352 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 NDST2P52849 883 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ADKP55263 362 aaKnown RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 SNRPD1P62314 119 aaKnown RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 GPLD1P80108 840 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ARF5P84085 180 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 RAD51Q06609 339 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF252P-AS1Q0IIN9 211 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 PARP15Q460N3 678 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 CARD16Q5EG05 197 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 PPP6R3Q5H9R7 873 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 KIAA0895LQ68EN5 471 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3GQ6DHY5 549 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3CQ6IPX1 549 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 NCEH1Q6PIU2 408 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 IL27RAQ6UWB1 636 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 RFX8Q6ZV50 586 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TBC1D3Q8IZP1 549 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 UMODL1-AS1Q8N2C9 162 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ZCCHC9Q8N567 271 aaKnown RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 AADATQ8N5Z0 425 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ARFGAP1Q8N6T3 406 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 NIPA2Q8N8Q9 360 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 OR2A12Q8NGT7 310 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF564Q8TBZ8 553 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 CASKIN2Q8WXE0 1202 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 SKA1Q96BD8 255 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 BIRC7Q96CA5 298 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 PPP1R16AQ96I34 528 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 LRIG1Q96JA1 1093 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 HEPHQ9BQS7 1158 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ANP32EQ9BTT0 268 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 GTPBP2Q9BX10 602 aaKnown RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TRIM7Q9C029 511 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ZDHHC5Q9C0B5 715 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 TNKS2Q9H2K2 1166 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 NHEJ1Q9H9Q4 299 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 LIN7BQ9HAP6 207 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 CAPN10Q9HC96 672 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 OSGEPQ9NPF4 335 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 GPATCH2LQ9NWQ4 482 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 CTTNBP2NLQ9P2B4 639 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 UVRAGQ9P2Y5 699 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 IL36AQ9UHA7 158 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 SARDHQ9UL12 918 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 NEU3Q9UQ49 428 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF292O60281 2723 aa7.5□□□□□ -1.21
CPSF7-224ENST00000544990 A0A1W2PPC4 97 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 H3BRJ5 948 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 KPNA3O00505 521 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 CDX4O14627 284 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 PLRG1O43660 514 aaKnown RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 OPHN1O60890 802 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms