RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
DDX11-227ENST00000544652 SARDHQ9UL12 918 aa13.23□□□□□ -0.29
DDX11-227ENST00000544652 SCML1Q9UN30 329 aa13.23□□□□□ -0.29
DDX11-227ENST00000544652 TTLL3Q9Y4R7 772 aa13.23□□□□□ -0.29
DDX11-227ENST00000544652 THADAQ6YHU6 1953 aa13.23□□□□□ -0.29
DDX11-227ENST00000544652 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
DDX11-227ENST00000544652 TRPM6Q9BX84 2022 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 TCRBV21S2A2A0A5A6 115 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 TSPAN11A1L157 253 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 PRR33A8MZF0 331 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 C1QTNF3-AMACRE9PGA6 284 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 FZD6O60353 706 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 RNASEH1O60930 286 aaKnown RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 ECEL1O95672 775 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 GAS8O95995 478 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 MT-CYBP00156 380 aaPredicted RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 IFNB1P01574 187 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 KRT14P02533 472 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 SERPINF2P08697 491 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 ZSCAN5DPP0CG00 497 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 NDUFV2P19404 249 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 PSMB4P28070 264 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 HOXA6P31267 233 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 ACTN2P35609 894 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 CD86P42081 329 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 ZBTB16Q05516 673 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 PTK6Q13882 451 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 ARSIQ5FYB1 569 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 KDELC1Q6UW63 502 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 GDPD4Q6W3E5 623 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 ARHGEF18Q6ZSZ5 1173 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 SYDE1Q6ZW31 735 aaPredicted RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 MMAAQ8IVH4 418 aaKnown RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 RYBPQ8N488 228 aaPredicted RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 SPATA22Q8NHS9 363 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 PIP4K2CQ8TBX8 421 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 OXNAD1Q96HP4 312 aaPredicted RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 RBM15Q96T37 977 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDX11-227ENST00000544652 KRT12Q99456 494 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 TDRD1Q9BXT4 1180 aaKnown RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 SUV39H2Q9H5I1 410 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 ATP13A3Q9H7F0 1226 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 DKK3Q9UBP4 350 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 AAR2Q9Y312 384 aaKnown RBP13.22□□□□□ -0.29
DDX11-227ENST00000544652 PCDHGA10Q9Y5H3 936 aa13.22□□□□□ -0.29
DDX11-227ENST00000544652 NUMA1Q14980 2115 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 A0A1W2PQ67 120 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 CTAGE15A4D2H0 777 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 ANXA9O76027 345 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 PIGNO95427 931 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 ADH1BP00325 375 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 CTAGE8P0CG41 777 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 TDGF1P13385 188 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 C5AR1P21730 350 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 ITGB7P26010 798 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 SERPINA4P29622 427 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 AVPR2P30518 371 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 FDFT1P37268 417 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 GEMP55040 296 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 DR1Q01658 176 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 BCL2L1Q07817 233 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 TRAF2Q12933 501 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 MPP3Q13368 585 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 SEMA5AQ13591 1074 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 CST6Q15828 149 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 ZNF805Q5CZA5 627 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 FAM46CQ5VWP2 391 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 CTAGE6Q86UF2 777 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 JAMLQ86YT9 394 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 CAMK1DQ8IU85 385 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 CTAGE4Q8IX94 777 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 DTWD2Q8NBA8 298 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 MDGA1Q8NFP4 955 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 TSTD1Q8NFU3 115 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 GRIN3AQ8TCU5 1115 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 CCHCR1Q8TD31 782 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 PRCCQ92733 491 aaPredicted RBP13.21□□□□□ -0.29
DDX11-227ENST00000544652 MLPHQ9BV36 600 aaPredicted RBP13.21□□□□□ -0.29
DDX11-227ENST00000544652 CARD6Q9BX69 1037 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 ETNK1Q9HBU6 452 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 SPATA6Q9NWH7 488 aaPredicted RBP13.21□□□□□ -0.29
DDX11-227ENST00000544652 FAM153AQ9UHL3 310 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 PCDHGC4Q9Y5F7 938 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 ZNF318Q5VUA4 2279 aa13.21□□□□□ -0.29
DDX11-227ENST00000544652 BDP1A6H8Y1 2624 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 PLXNB3Q9ULL4 1909 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 CCDC163A0A0D9SF12 145 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 LOC285095A0A1B0GVY8 99 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 FAM187AA6NFU0 413 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 ERI2A8K979 691 aaKnown RBP13.2□□□□□ -0.3
DDX11-227ENST00000544652 TTI1O43156 1089 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 ALDH1A2O94788 518 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 PGLSO95336 258 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 APBB3O95704 486 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 PRLP01236 227 aa13.2□□□□□ -0.3
DDX11-227ENST00000544652 IL1BP01584 269 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms