RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 TBATAQ96M53 351 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 DCBLD2Q96PD2 775 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 KLF6Q99612 283 aaPredicted RBP13.29□□□□□ -0.28
RTN3-213ENST00000543552 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 CPEB1Q9BZB8 566 aaKnown RBP13.29□□□□□ -0.28
RTN3-213ENST00000543552 ABCG4Q9H172 646 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 SPASTQ9UBP0 616 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 UBA2Q9UBT2 640 aaPredicted RBP13.29□□□□□ -0.28
RTN3-213ENST00000543552 ITM2BQ9Y287 266 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 IGSF10Q6WRI0 2623 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 K7ESM1 405 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 AQP9O43315 295 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 OPA1O60313 960 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 RNF8O76064 485 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 MT-CO3P00414 261 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 JUNDP17535 347 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 PSMA2P25787 234 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 RPIAP49247 311 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 ZNF135P52742 658 aaPredicted RBP13.28□□□□□ -0.28
RTN3-213ENST00000543552 CLDN6P56747 220 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 PFN3P60673 137 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 ASIC2Q16515 512 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 ZNF542PQ5EBM4 170 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 ERAP2Q6P179 960 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 TRIM11Q96F44 468 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 IL12RB2Q99665 862 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 MAGEB5Q9BZ81 275 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 NOL6Q9H6R4 1146 aaKnown RBP13.28□□□□□ -0.28
RTN3-213ENST00000543552 AP4E1Q9UPM8 1137 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 SCINQ9Y6U3 715 aa13.28□□□□□ -0.28
RTN3-213ENST00000543552 ARHGAP42A6NI28 874 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 EEF2KO00418 725 aaKnown RBP13.27□□□□□ -0.29
RTN3-213ENST00000543552 TPP1O14773 563 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 DAPK3O43293 454 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 GIMD1P0DJR0 217 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 ATP1A3P13637 1013 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 BLKP51451 505 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 MAMLD1Q13495 774 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 BRAT1Q6PJG6 821 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 KDM7AQ6ZMT4 941 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 MACC1Q6ZN28 852 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 IRF2BP2Q7Z5L9 587 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 VPS36Q86VN1 386 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 PSTKQ8IV42 348 aaKnown RBP13.27□□□□□ -0.29
RTN3-213ENST00000543552 LSMEM2Q8N112 164 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 ATL2Q8NHH9 583 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 TPCN2Q8NHX9 752 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 SNIP1Q8TAD8 396 aaKnown RBP13.27□□□□□ -0.29
RTN3-213ENST00000543552 MAPK15Q8TD08 544 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 LMX1AQ8TE12 382 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 CENPTQ96BT3 561 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 GRAMD1AQ96CP6 724 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 ZNF641Q96N77 438 aaPredicted RBP13.27□□□□□ -0.29
RTN3-213ENST00000543552 TUBGCP5Q96RT8 1024 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 HSD3B7Q9H2F3 369 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 DHX35Q9H5Z1 703 aaKnown RBP13.27□□□□□ -0.29
RTN3-213ENST00000543552 ATP13A3Q9H7F0 1226 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
RTN3-213ENST00000543552 APOBEC3BQ9UH17 382 aaKnown RBP13.27□□□□□ -0.29
RTN3-213ENST00000543552 GGT7Q9UJ14 662 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 SALL4Q9UJQ4 1053 aa13.27□□□□□ -0.29
RTN3-213ENST00000543552 LRRC53A6NM62 1247 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 EIF4E1BA6NMX2 242 aaKnown RBP13.26□□□□□ -0.29
RTN3-213ENST00000543552 SPINT1O43278 529 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 PRPSAP2O60256 369 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 BRINP1O60477 761 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 PRAMEF11O60813 436 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 MMP20O60882 483 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 NEBLO76041 1014 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 GZMAP12544 262 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 HTR1BP28222 390 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 SERPINA4P29622 427 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 EIF2S3P41091 472 aaKnown RBP13.26□□□□□ -0.29
RTN3-213ENST00000543552 PEX5P50542 639 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 RFTN1Q14699 578 aaPredicted RBP13.26□□□□□ -0.29
RTN3-213ENST00000543552 LRRC14Q15048 493 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 NR0B2Q15466 257 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 ANO6Q4KMQ2 910 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 CDCP2Q5VXM1 449 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 PLEKHA7Q6IQ23 1121 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 PAF1Q8N7H5 531 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 WDR48Q8TAF3 677 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 IFI44Q8TCB0 444 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 FNIP1Q8TF40 1166 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 SCG3Q8WXD2 468 aaKnown RBP13.26□□□□□ -0.29
RTN3-213ENST00000543552 FGF11Q92914 225 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 NAT6Q93015 286 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 EXOC2Q96KP1 924 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 WRAP53Q9BUR4 548 aaKnown RBP13.26□□□□□ -0.29
RTN3-213ENST00000543552 SUV39H2Q9H5I1 410 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 LRRC19Q9H756 370 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 SP110Q9HB58 689 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 MRPL47Q9HD33 250 aaKnown RBP13.26□□□□□ -0.29
RTN3-213ENST00000543552 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
RTN3-213ENST00000543552 MYLKQ15746 1914 aa13.25□□□□□ -0.29
RTN3-213ENST00000543552 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
RTN3-213ENST00000543552 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms