RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	PIM1	P11309	404 aa	Predicted RBP	13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	VCL	P18206	1134 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	PAPOLA	P51003	745 aa	Known RBP	13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	NRG1	Q02297	640 aa	Predicted RBP	13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	FLOT2	Q14254	428 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	ZNF423	Q2M1K9	1284 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	FAM83E	Q2M2I3	478 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	GRAMD1B	Q3KR37	738 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	MMEL1	Q495T6	779 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	PAN2	Q504Q3	1202 aa	Known RBP	13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	PIGG	Q5H8A4	983 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	TSTD2	Q5T7W7	516 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	LRRTM3	Q86VH5	581 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	TMEM126B	Q8IUX1	230 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	KDM1B	Q8NB78	822 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	PHC3	Q8NDX5	983 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	CATSPER1	Q8NEC5	780 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	OR10T2	Q8NGX3	314 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	CEP70	Q8NHQ1	597 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	ZNF483	Q8TF39	744 aa	Predicted RBP	13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	HEXDC	Q8WVB3	486 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	RSPH1	Q8WYR4	309 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	CASP10	Q92851	521 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	TSPAN17	Q96FV3	270 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	ZIC5	Q96T25	663 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	CENPK	Q9BS16	269 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	POMK	Q9H5K3	350 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	WDR41	Q9HAD4	459 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	EML4	Q9HC35	981 aa	Known RBP	13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	SAGE1	Q9NXZ1	904 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	SFMBT1	Q9UHJ3	866 aa		13.61	□□□□□ -0.23
PPME1-208	ENST00000543525	HEATR9	A2RTY3	570 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	WASH4P	A8MWX3	477 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525		E9PAM4	449 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	CFLAR	O15519	480 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	MAP3K13	O43283	966 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	DUSP11	O75319	330 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	ENO3	P13929	434 aa	Predicted RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	CPB1	P15086	417 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	ME2	P23368	584 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	CALR	P27797	417 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	GRIK1	P39086	918 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	CLCN5	P51795	746 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	SLC5A3	P53794	718 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	WNT3A	P56704	352 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	SH2D4B	Q5SQS7	431 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	AGAP9	Q5VTM2	703 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	FOXB2	Q5VYV0	432 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	GDF6	Q6KF10	455 aa	Predicted RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	KLC3	Q6P597	504 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	TRIM67	Q6ZTA4	783 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	TXNDC5	Q8NBS9	432 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	DLG3	Q92796	817 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	LRGUK	Q96M69	825 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	RANBP9	Q96S59	729 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	TMEM209	Q96SK2	561 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	OMD	Q99983	421 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	SLC25A51	Q9H1U9	297 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525		Q9H521	79 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	GTSE1	Q9NYZ3	720 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	INPP5F	Q9Y2H2	1132 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	MYADML2	A6NDP7	307 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	MSI1	O43347	362 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	RBP1	P09455	135 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	TYMP	P19971	482 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	THOP1	P52888	689 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	MGAT3	Q09327	533 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	TUSC3	Q13454	348 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	PSMD5	Q16401	504 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	GNAS	Q5JWF2	1037 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	RARS2	Q5T160	578 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	TMEM198	Q66K66	360 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	KDELC1	Q6UW63	502 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	CD300LG	Q6UXG3	332 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	SPATA6L	Q8N4H0	392 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	MAEL	Q96JY0	434 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	SERPINB11	Q96P15	392 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	ARNT2	Q9HBZ2	717 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	MRPL40	Q9NQ50	206 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	IGSF5	Q9NSI5	407 aa		13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	IPO11	Q9UI26	975 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	COPG1	Q9Y678	874 aa	Known RBP	13.6	□□□□□ -0.23
PPME1-208	ENST00000543525	KCNU1	A8MYU2	1149 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	SDHD	O14521	159 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	TXNDC9	O14530	226 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	MOCS2	O96007	188 aa	Predicted RBP	13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	LTA4H	P09960	611 aa	Known RBP	13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	CD1E	P15812	388 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	XRCC1	P18887	633 aa	Predicted RBP	13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	CHRNA4	P43681	627 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	SERPINH1	P50454	418 aa	Known RBP	13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	PFKP	Q01813	784 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	CSHL1	Q14406	222 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	PDK3	Q15120	406 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	MAPRE2	Q15555	327 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	TAF1C	Q15572	869 aa	Predicted RBP	13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	PCSK7	Q16549	785 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms