RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 GZMAP12544 262 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 PSMC3P17980 439 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 FCARP24071 287 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 NTF4P34130 210 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MRE11P49959 708 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MAPK10P53779 464 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 RNASE9P60153 205 aaKnown RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 TDGQ13569 410 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 BLMHQ13867 455 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 C2CD6Q53TS8 623 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 BROXQ5VW32 411 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 BHLHA9Q7RTU4 235 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 PHLDB2Q86SQ0 1253 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 XYLT1Q86Y38 959 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 KIF18BQ86Y91 864 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MFSD6LQ8IWD5 586 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MCOLN2Q8IZK6 566 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 SLC44A3Q8N4M1 653 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 ARL6IP6Q8N6S5 226 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 TC2NQ8N9U0 490 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 BPIFB1Q8TDL5 484 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 SH3RF2Q8TEC5 729 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 DEPDC1BQ8WUY9 529 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 PANX2Q96RD6 677 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 RPP25Q9BUL9 199 aaKnown RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 TRMT61BQ9BVS5 477 aaKnown RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 PLA2G2FQ9BZM2 168 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 NHEJ1Q9H9Q4 299 aaPredicted RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 TAS2R14Q9NYV8 317 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MARCH2Q9P0N8 246 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 ARHGAP20Q9P2F6 1191 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 PCOLCE2Q9UKZ9 415 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 NAALADL1Q9UQQ1 740 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 CCL26Q9Y258 94 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 RAXQ9Y2V3 346 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 COQ6Q9Y2Z9 468 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 ZDBF2Q9HCK1 2354 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 NOTCH4Q99466 2003 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 SSU72P8A0A1W2PR75 194 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 CHURC1-FNTBB4DL54 471 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF263O14978 683 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MDM4O15151 490 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 DAB1O75553 588 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 CSTBP04080 98 aaKnown RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 HMBSP08397 361 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MYBL1P10243 752 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 IRF1P10914 325 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 KRT3P12035 628 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 GBP1P32455 592 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 KPNA1P52294 538 aaPredicted RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 COG7P83436 770 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 CDK17Q00537 523 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 GFPT1Q06210 699 aaPredicted RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 DCAF6Q58WW2 860 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 CCDC122Q5T0U0 273 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 DNAJC24Q6P3W2 148 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 WDR59Q6PJI9 974 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 PAOXQ6QHF9 649 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 VITQ6UXI7 678 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 NEK10Q6ZWH5 1172 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MON1BQ7L1V2 547 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 BEND5Q7L4P6 421 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 SLC26A9Q7LBE3 791 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 UBE3DQ7Z6J8 389 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 LCA5Q86VQ0 697 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 GALNT13Q8IUC8 556 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 DEFB106AQ8N104 65 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 KRT78Q8N1N4 520 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 CARNMT1Q8N4J0 409 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 UCMAQ8WVF2 138 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 STON2Q8WXE9 905 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 EZH1Q92800 747 aaPredicted RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 RSPRY1Q96DX4 576 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 PIWIL1Q96J94 861 aaKnown RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 VCPIP1Q96JH7 1222 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 SORBS1Q9BX66 1292 aaKnown RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM120AQ9BXJ8 343 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 KLHL25Q9H0H3 589 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 GKN1Q9NS71 199 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 CFAP97Q9P2B7 532 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 LSM7Q9UK45 103 aaKnown RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 STAP1Q9ULZ2 295 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 RABL2BQ9UNT1 228 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 SORCS3Q9UPU3 1222 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 DENND4AQ7Z401 1863 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 DOCK6Q96HP0 2047 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 PATJQ8NI35 1801 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SYNJ2BP-COX16A0A087WUM0 186 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 A0A087X0T9 212 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SLC9A3R1O14745 358 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 CHADO15335 359 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 B3GALT2O43825 422 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 FYNP06241 537 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 FAM228BP0C875 321 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SRFP11831 508 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 DESP17661 470 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 GDI1P31150 447 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 MATKP42679 507 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 IFNAR2P48551 515 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms